| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA1286 |
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| Symbol | dnaE |
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| ID | 3102379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | + |
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| Start bp | 1369778 |
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| End bp | 1373275 |
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| Gene Length | 3498 bp |
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| Protein Length | 1165 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637170464 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_113748 |
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| Protein GI | 53804349 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.148493 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGCCTA AGTTCGTCCA TCTCCGGATT CACACCGAAT ATTCCCTGGT CGACGGGATA
GTCCGGATCA AGCCGCTGGT CAAGCGGCTG TCCGAATTTG GCATGCCGGC GGTCGCGGTC
ACTGACCAGT GCAACTTGTT TGCATTGGTC AAGTTTTACA AAGCGGCCAT GGGTGCCGGT
ATCAAGCCGA TCGCGGGGGC CGACGTCTGG CTGCAGAACC CGCAGGACGT AAGTTCCCCT
CACCGGCTCA CCCTGCTGGT CCAGAACCAG GAGGGTTATC TCGCGCTGAC CGAACTGATT
TCGCGTAGCT ACCAGGAAAA CCAGCACCAG GGTGTTCCCA TGCTGATGCC GGAATGGCTG
GCGGACTGTA ACGCCGGCCT GATCGCCCTC TCGGGCGGCC GCGATGGTGC CATCGGCCAT
GCCCTGCTCG CCGGCAGCGG TGCGGAAGCG ACGCGGTTGG CCGAGTACTG GGGAGGGATG
TTCCGGGATC GTTTCTATCT CGAAGTGTGC CGGACGGGGC GCGCCAACGA GGAGCGTTAC
ATCGATGCGG CGGTGGAATT GGCCGCCTGT CTGGACCTGC CGGTGGTCGC CACCAATGAC
GTCCGCTTCC TGTCCGCGAA GGAGTTCGAG GCCCACGAAG CGCGGGTCTG CATCCACCAG
GGGCGGGTGC TGGACGACCC GCGCCGGCCG CGGGACTACA GCGAGCAGCA GTATCTACGC
AGCGAGGAGG AGATGCTGTC GCTGTTCGCC GATTTGCCGG AGGCGCTGGA GAACAGCGTC
GAGATCGCCC GCCGCTGCAA CCTCGGCCTG ACGCTGGGCA AGAATTTCCT GCCGGATTTT
CCGGTGCCGG CGGGCATGAC GCCCGACGAT TTCTTCTCGG AGCAGTCGCG CCAAGGGCTG
AAGGAACGTC TGGCCGTACG ACCGCCTTCC GGAGCCGGGA CCCTGGAAGA GCGGACCCAG
CGTTACTGGT GTCGGCTCGA ATTGGAGTTG TCGGTGATCC GGGAGATGGG CTTTCCAGGC
TACTTCCTCA TCGTCGCCGA CTTCATTCAG TGGGCCAAGA GCCAGGGTAT CCCGGTGGGG
CCGGGACGCG GCTCCGGTGC CGGTTCTCTG GTGGCCTATG CGCTCAAGAT CACTGACCTC
GATCCGATCG AATTCGATCT GCTGTTCGAG CGCTTCCTCA ATCCCGAACG CGTCTCCATG
CCCGACTTCG ACGTCGACTT CTGCATGGAA CGGCGCGACG AGGTGATCGA CTACGTCGCC
CGCAAATACG GCCGCGACAA GGTGTCCCAG ATCATCACCT ACGGCAGCAT GGCCGCCAAG
GCCGTGGTGC GCGATGTCGG CCGGGTGCTG GGCCACCCTT ACGGTTTTGT CGACCGTATC
GCCAAGCTGA TTCCGTTCGA GCTCGGTATC ACCTTGAGCA AGGCGCTGGA GGACAGCGAA
GAGCTGCGCA AGTCGTACGA GGAAGACGAG GAGGTCAGGG CGCTTCTCGA TCTGGCCCAG
TCGCTCGAAG GCATCACCCG CAATCCGGGC AAACATGCCG GGGGGGTGGT GATCGCGCCT
TCGCGGCTGA TCGATTTCAG TCCGTTGTAC TGCGAGCCCG GCGGCGGCAA CCTGGTGACC
CAGTTCGACA AAGACGACGT GGAAGCGGTC GGCCTGGTCA AGTTCGACTT TCTGGGACTC
AGGACTCTGA CGATCATCGA CTGGGCGTTG GCCGACATCA ACGCCAAACG CCGGGCGGCG
GGGGAGGAGC CGGTCGACAT CAACCGGATT CCCCTGGACG ATCCCAAGAC CTATGAGCTG
CTCGGGAGGT GCGCGACCAC CGCGGTGTTC CAGCTCGAAT CGCGCGGCAT GAAGGACCTG
ATCAAGCGCC TCAAGCCGGA CTGCTTCGAG GACATCATCG CCCTGGTCGC ATTGTTCCGC
CCCGGCCCGC TGCAGTCCGG GATGGTGGAT GATTACATCA ACGTCAAGCA CGGCCGGACC
AAGGCGGAAT ATCCCCATCC GGTGCTGGAG CCCATCCTCA AACCGACCAA CGGCGTCATC
CTGTACCAGG AACAGGTGAT GCAGATCGCC CGTGACATGG CCGGCTATAC CCTGGGCGGA
GCCGACCTGC TGCGGCGCGC CATGGGCAAG AAGAAGCCGG AGGAGATGGC GAAGCAAAGG
GAAATCTTCA TTGCCGGTGC CACCAGACAA GGCATAGATC CGAGCATCTC CTCCCACATC
TTCGATTTGA TGGAGAAGTT TGCCGGCTAT GGGTTCAACA AGTCGCACTC CGCCGCCTAT
GCCCTGGTGT CGTACCAGAC CGCCTGGCTC AAGGCTCACT ATCCGGCCGA GTTCATGTCG
GCGGTGCTGT CGGCCGACAT GGACAATACC GACAAGGTCG TCGTGCTGAT CGACGAGTGC
CGTGAGATGA AGCTGTCCAT CCTGCCGCCC GACATCAATC TCTCGGAATA CCGGTTTACC
GTCCGGGGCC GGCGGGAAAT CCTCTACGGC TTGGGGGCGG TCAAGGGCGT GGGCCAGACC
GCGATCGACG ACATTCTGCA GGAGCGGAAG AACAATGGAC CGTTCACCGA CCTGCTCGAC
CTGTGCCGGC GCATCGACCT CCGCAAGGCC AACCGGCGGG TGCTGGAGGC GATGATCCGG
GCGGGCGTGT TCGATTGTTT CGACCGGAAC CGGGCCGCCT TGTTCGCCGC CCTGCCGGAC
GTGGTGAAGG CGGCGGAGCA GCAGGGTGCC ATGAGCGCCG CCGGTCAGGA CGACCTGTTC
GGCGGCTTTA CCGCTGAGAG CCCCGCGGCC TCCAGCGCAG GTCTGGTGGC GACGGAGATC
GAACCCTGGG CCGAAGCGGA ACGGCTGGCC CAGGAAAAAG CCACGCTGGG CTTGTATCTC
ACCGGCCATC CGATCACACC GCACGAGCGC GAACTCGAGC AGATCGTCAC GAGCCGGCTC
GGTCCTCTCA TGGGAGAGGG TGAAGGTGGC AGGGGAGACA CGCGGGTGGT GGTGGCGGGC
CTCATCGTCG ACATCCGCAC TCGGCTCACT CGCAGCGGCC AGAAAATGGG CTTCCTGTCG
CTGGACGACC GTACCGGGCG CATGGAGATC GCGGTCTATA CGGAGACCTT CCAGCGTGAC
GGCCACCATC TTGCCAAGGA TGGCCTCATC GTGGTCGATG GAACGTTGGG ATACGACGAA
TATGCCGGCC AAACCCGCAT CACCGCCGAA AGAATATTGA GCATCGAGGA TGCGAGGGCG
CACTTCGCCC GCTGTCTCCG GATCGAATGG CCCGGTGCCG TGCCCGACGG CGTTCCCCCG
TCATTTCTGG CGGAATTCAA GAAACTGCTC GACCGGTTCG CGGGAGGGGG GTGTCCGGTC
CATGTCGCGT ACCGGGGACG GAGAGCGCAG ACCGTGCTCC GTCTGGGTGA TGGCTGGCGG
GTCCATCCAC GGGACGAGTT GCTCGGGTGT CTGCGGAAAT GGATAGGCAG TTCCCGGGTT
CAGGTAGTGT ACCGCTGA
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| Protein sequence | MEPKFVHLRI HTEYSLVDGI VRIKPLVKRL SEFGMPAVAV TDQCNLFALV KFYKAAMGAG
IKPIAGADVW LQNPQDVSSP HRLTLLVQNQ EGYLALTELI SRSYQENQHQ GVPMLMPEWL
ADCNAGLIAL SGGRDGAIGH ALLAGSGAEA TRLAEYWGGM FRDRFYLEVC RTGRANEERY
IDAAVELAAC LDLPVVATND VRFLSAKEFE AHEARVCIHQ GRVLDDPRRP RDYSEQQYLR
SEEEMLSLFA DLPEALENSV EIARRCNLGL TLGKNFLPDF PVPAGMTPDD FFSEQSRQGL
KERLAVRPPS GAGTLEERTQ RYWCRLELEL SVIREMGFPG YFLIVADFIQ WAKSQGIPVG
PGRGSGAGSL VAYALKITDL DPIEFDLLFE RFLNPERVSM PDFDVDFCME RRDEVIDYVA
RKYGRDKVSQ IITYGSMAAK AVVRDVGRVL GHPYGFVDRI AKLIPFELGI TLSKALEDSE
ELRKSYEEDE EVRALLDLAQ SLEGITRNPG KHAGGVVIAP SRLIDFSPLY CEPGGGNLVT
QFDKDDVEAV GLVKFDFLGL RTLTIIDWAL ADINAKRRAA GEEPVDINRI PLDDPKTYEL
LGRCATTAVF QLESRGMKDL IKRLKPDCFE DIIALVALFR PGPLQSGMVD DYINVKHGRT
KAEYPHPVLE PILKPTNGVI LYQEQVMQIA RDMAGYTLGG ADLLRRAMGK KKPEEMAKQR
EIFIAGATRQ GIDPSISSHI FDLMEKFAGY GFNKSHSAAY ALVSYQTAWL KAHYPAEFMS
AVLSADMDNT DKVVVLIDEC REMKLSILPP DINLSEYRFT VRGRREILYG LGAVKGVGQT
AIDDILQERK NNGPFTDLLD LCRRIDLRKA NRRVLEAMIR AGVFDCFDRN RAALFAALPD
VVKAAEQQGA MSAAGQDDLF GGFTAESPAA SSAGLVATEI EPWAEAERLA QEKATLGLYL
TGHPITPHER ELEQIVTSRL GPLMGEGEGG RGDTRVVVAG LIVDIRTRLT RSGQKMGFLS
LDDRTGRMEI AVYTETFQRD GHHLAKDGLI VVDGTLGYDE YAGQTRITAE RILSIEDARA
HFARCLRIEW PGAVPDGVPP SFLAEFKKLL DRFAGGGCPV HVAYRGRRAQ TVLRLGDGWR
VHPRDELLGC LRKWIGSSRV QVVYR
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