Gene MCA1285 details

Gene Information

• Locus tag: MCA1285
• Symbol: rfbD
• ID: 3102225
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: +
• Start bp: 1368458
• End bp: 1369363
• Gene Length: 906 bp
• Protein Length: 301 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 637170463
• Product: dTDP-4-dehydrorhamnose reductase
• Protein accession: YP_113747
• Protein GI: 53804350
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1091] dTDP-4-dehydrorhamnose reductase
• TIGRFAM ID: [TIGR01214] dTDP-4-dehydrorhamnose reductase

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.181094
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGATCC TCGTCGTCGG CAGGAGCGGG CAACTGGCCT GGGAACTGCG GCGCACGCTG 
GCCTGTTTCG GCGAGGTCGT CGCGCTCGAT CGCCAGTCGG AACCGGCGAT CGATCTGGCC 
GAGCCCGGTG CCGTTGCCGC CTTGGTGCGC GCCGTCAGGC CCGATCTGAT CGTCAACGCG 
GCAGCCTATA CCGCGGTCGA TCGGGCCGAG CAGGAGCCGG ATTTGGCCTG GAAGGTGAAC 
GCCGAGGCGC CGGCTGTGCT GGCAGCGGAA GCGACGCGTC TGGGCATAGG CCTGATCCAT 
TATTCGACCG ACTACGTTTT TCCCGGTGAC GGCGCTGTGC CGTACCGGGA GGACGACCCG 
GTTGGTCCGC GGAACGTGTA TGGCCGCAGC AAACTGGCCG GGGAGCAGGC CATCGCTGCA 
TCCGGCGCCG CTCACCTCAT TCTCCGCACC GCCTGGGTCT ATGGGGTGCG CGGCCAGAAC 
TTCCTGAGGA CCATGTTGCG GCTCATGGCC GAGCGCGAGG TGGTGCGGGT CATCGACGAT 
CAGTTCGGAG CTCCCACCTG GGTTCGGATG ATCGCCGAGG CGACGGCGAT TCTGGTGGCG 
AGCTCACTGC GTTCCGGCAC GGCCGATTTG GCGGGGGCGA GCGGTGTCTA CCATCTCACC 
TGCAGCGGCC AGACCAGCTG GTACGGCTTC GCCTGCGCCA TCCGGGAGCA TGCCGTGGCC 
GCCGGATTGC TCCCCGACAC TGCGGCCCGG GTCGAGGCCA TCCCGACTTC GGAATATCCC 
ACTCCGGCCA AGCGGCCGGC TCATTCGGTG CTGGATTTGG GCAAGCTCGA GGCGCGCTTC 
GGCATCGTGC TCCCCGTTTG GGACCAGGCG CTGGAGCTTT GTTTGGCCGA TCTGGCCGGT 
CGGTGA 

 

Protein sequence

MKILVVGRSG QLAWELRRTL ACFGEVVALD RQSEPAIDLA EPGAVAALVR AVRPDLIVNA 
AAYTAVDRAE QEPDLAWKVN AEAPAVLAAE ATRLGIGLIH YSTDYVFPGD GAVPYREDDP 
VGPRNVYGRS KLAGEQAIAA SGAAHLILRT AWVYGVRGQN FLRTMLRLMA EREVVRVIDD 
QFGAPTWVRM IAEATAILVA SSLRSGTADL AGASGVYHLT CSGQTSWYGF ACAIREHAVA 
AGLLPDTAAR VEAIPTSEYP TPAKRPAHSV LDLGKLEARF GIVLPVWDQA LELCLADLAG 
R