Gene MCA1282 details

Gene Information

• Locus tag: MCA1282
• Symbol: rfbB
• ID: 3103251
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: +
• Start bp: 1365950
• End bp: 1367023
• Gene Length: 1074 bp
• Protein Length: 357 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 637170460
• Product: dTDP-glucose 4,6-dehydratase
• Protein accession: YP_113744
• Protein GI: 53804360
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1088] dTDP-D-glucose 4,6-dehydratase
• TIGRFAM ID: [TIGR01181] dTDP-glucose 4,6-dehydratase

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.306583
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAAACTC TACTCGTCAC CGGCGGAGCC GGATTCATCG GCGGCAATTT CGTACTCAGA 
CAGCTGCGGC GGGGTGGCGT CGAGGTCGTC AACCTGGATG CCCTGACCTA TTCCGGTAAT 
CTGCGGACCC TGGCTGAAGT CGAGGACAAT CCGAACCACG ACTTCGTACT GGGTTCGATC 
GGCGACCGCG AACTGGTCGA ATACCTGCTG GAACGCTACC AGCCCGATGC GGTCGTCAAT 
TTCGCCGCGG AGACCCATGT CGACCGTTCG ATCGACGGCC CCGACGCTTT CGTTCACACC 
AACGTCATTG GCACTTTCGA GCTGCTGGAA GCCACCCGTT GGTACTGGCG CCAGCTGGAC 
GGTGAGCGTC GTAAGGCATT CCGGTTTCTG CACGTCTCGA CCGACGAGGT GTATGGAACG 
CTGGGTGCGA CCGGCAAATT CACCGAAGAG ACACCGTACC GGCCCAATTC GCCGTATTCG 
GCGTCCAAAG CCGGTTCCGA CCACCTGGTG AGGGCGTATT TCCATACTTA CGGTCTGCCG 
GTGCTGACCA CCAACTGCTC GAACAATTAC GGGCCGTACC AGTTTCCGGA GAAATTGATT 
CCGTTGATGA TCGACCATGC GCTCCAGGGC CTGCCGCTGC CGGTGTACGG CGCGGGTACC 
AACGTCCGTG ACTGGCTCTA CGTGGAGGAC CACTGCCGCG CCATCGAAAC CGTTTTGGCC 
CGAGGCAGGC CGGGCGAGGT TTACAACGTC GGCGGCAACA ACGAAAAGAC CAACATCGAG 
GTGGTCGAGA CGATCTGTGC TCTGCTCGAT GAATTTCTAC CCGATTCGCC CCACCGACCG 
CACCGCCAGC TGATCCGGTT CGTGCAGGAT CGGCCGGGCC ACGATCTGCG CTACGCCATC 
GATGCAGGCA AGATCGGCCG GGAGCTGGGC TGGCAACCGG AGGAGACTTT CGAAACCGGC 
CTGCGCAAGA CGGTGCGCTG GTATCTCGCC AACCGCGACT GGGTGGAGCA CGTCAAGTCC 
GGCAACTACG GCGGCGAGCG CCTCGGCGTC GGCGGCATCG AGGCGCAGGC ATGA 

 

Protein sequence

MKTLLVTGGA GFIGGNFVLR QLRRGGVEVV NLDALTYSGN LRTLAEVEDN PNHDFVLGSI 
GDRELVEYLL ERYQPDAVVN FAAETHVDRS IDGPDAFVHT NVIGTFELLE ATRWYWRQLD 
GERRKAFRFL HVSTDEVYGT LGATGKFTEE TPYRPNSPYS ASKAGSDHLV RAYFHTYGLP 
VLTTNCSNNY GPYQFPEKLI PLMIDHALQG LPLPVYGAGT NVRDWLYVED HCRAIETVLA 
RGRPGEVYNV GGNNEKTNIE VVETICALLD EFLPDSPHRP HRQLIRFVQD RPGHDLRYAI 
DAGKIGRELG WQPEETFETG LRKTVRWYLA NRDWVEHVKS GNYGGERLGV GGIEAQA