Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA1281 |
Symbol | |
ID | 3103252 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | + |
Start bp | 1365141 |
End bp | 1365944 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637170459 |
Product | ABC transporter, permease protein |
Protein accession | YP_113743 |
Protein GI | 53804361 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.640698 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGCCGC TGCACTATCT GCGAGCGTTG CGCGGCATCG TCGCGCGCGA GCTGTACCGT TTCGTTCATC AGCGGGAGCG CTTCATCTCC GCCCTGGTGC GGCCCCTCGT CTGGCTGTTC GTGTTCGCCG CGGGATTCCG CTCGACCTTG GGTTTGGCGA TCAGTCCGCC GTATGAGACA TACATCCTCT ATGAGGTCTA CATCACACCG GGACTCCTGG GGATGATCCA GTTGTTCAAC GGCATGCAAA GTTCGCTGTC AATGGTGTAC GACCGTGAAA TGGGCAGCAT GCGGACCTTG CTGGTCAGTC CCCTGCCGCG CTGGTTTCTG CTGACCGCCA AGCTGGTCGC GGGCGTCGCC GTGTCGATCC TGCAGGCGTA TGTATTCCTG GGTGTCGCCT GGGCTTACGG TATCGAGGCA CCGGTCGAGG GGTATTTGGC GGTGCTGCCG GCGCTCTTGC TCTCCGGTGT GATGCTGGGG GCGCTCGGCC TGCTATTATC ATCGTTCATC CGCCAGTTGG AGAATTTCGC CGGCGTGATG AATTTCGTAA TATTCCCCAT GTTTTTCATG TCCACGGCGC TGTACCCGCT CTGGAAGATC CAGGAGTCCA GCGAGCTGCT GTATTGGCTG GCCCAATGGA ACCCTTTCTC ACAGGCGGTG GAACTGATCC GCTTCGCGTT GTATGGACGG TTCAACGGGG TGGCATGCGG CTACACGGCC GGGGCCACGG CGCTGTTTCT CGCCGCGGCG ATCGTCGGCT ACAACCCTTC CAAAGGCATG ATGCAGCGTA AAGGCGGCGC TTGA
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Protein sequence | MRPLHYLRAL RGIVARELYR FVHQRERFIS ALVRPLVWLF VFAAGFRSTL GLAISPPYET YILYEVYITP GLLGMIQLFN GMQSSLSMVY DREMGSMRTL LVSPLPRWFL LTAKLVAGVA VSILQAYVFL GVAWAYGIEA PVEGYLAVLP ALLLSGVMLG ALGLLLSSFI RQLENFAGVM NFVIFPMFFM STALYPLWKI QESSELLYWL AQWNPFSQAV ELIRFALYGR FNGVACGYTA GATALFLAAA IVGYNPSKGM MQRKGGA
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