Gene MCA1279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCA1279 
Symbol 
ID3102255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylococcus capsulatus str. Bath 
KingdomBacteria 
Replicon accessionNC_002977 
Strand
Start bp1363415 
End bp1364404 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content65% 
IMG OID637170457 
Producthypothetical protein 
Protein accessionYP_113741 
Protein GI53804363 
COG category[S] Function unknown 
COG ID[COG3391] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02276] 40-residue YVTN family beta-propeller repeat 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCGGA GACTTCGTGC CATGCCAAGC CATGACCGCC GCCTGATCGG CGTAGTCCTC 
GTCCTGCTCT GCGGTGTGGC GGCCGCGGAT ACCGTCTACG TCACCTTGGA GAAGGACGAC
GCCATCGCCG TCGTCGACGG CGCAACCGGC ATTCGGACCA GGACGGCCAG AATCGGCAAG
CGCCCGCGTG GTATCGCGCT GGCGAAGGAT GGCAACAGTC TCTATGTTGC CGCTAGCGAC
AGTGACGCCA TCCAGGTGAT CGATGCCGGG ACGCTGAACG TCACCGGGAC GCTGCCTGCC
GGCAAGGATC CGGAGACCTT CGCCATGGAT CCGGACGACC GGTTCCTGTA CGTCTCCAAC
GAGGACGACG GCCGGGTGAC GGTGATCGAC ATCGCCGCCC GCAAAGCGGT CAAAGAGATC
CCCGTGGGCA TCGAGCCGGA AGGCATCGCG GTCAGCCCGG ACGGGCGCTG GGTGGTAAGT
ACCAGCGAGA CCACCAACAT GGCGCACTGG ATCGACCGGG CCAAGCTGGA AGTCGTGGAC
AACACCCTCG TCGACCCGCG CCCACGCGCC GCGACTTTCA CCGCCGACAG CCGGCAGCTG
TGGGTCAGTT CCGAGATCGC CGGCACCGTC ACGGTGATCG ATACGGAAAC CCGCCAGCCT
CTCAAGACGA TTTCTTTCAA GATCGCCGGA GTGACTCCGG AGAAGGTCCA GCCGGTTGGC
ATCCGCATTG ATCCCGACCG GCGCTACGCC TATGTGGCGC TGGGGCCGGC CAACCGCGTC
GCGGTGGTCG ACGCGCAGAA GCTGGAAGTG AAGGATTACC TGCTGGTCGG CCAGCGGGTG
TGGAATCTGG AGTTTTCGCC GGACTTCGGG CGGCTGTATA CCACCAACGG TCTGAGCAAC
GATGTTTCCA TCATCGACCT GGCCTCACAC AAGGTGACCA AATCGGTGGC GGTGGGCTCC
CACCCCTGGG GGGTCGCTGT CCGGCCATGA
 
Protein sequence
MNRRLRAMPS HDRRLIGVVL VLLCGVAAAD TVYVTLEKDD AIAVVDGATG IRTRTARIGK 
RPRGIALAKD GNSLYVAASD SDAIQVIDAG TLNVTGTLPA GKDPETFAMD PDDRFLYVSN
EDDGRVTVID IAARKAVKEI PVGIEPEGIA VSPDGRWVVS TSETTNMAHW IDRAKLEVVD
NTLVDPRPRA ATFTADSRQL WVSSEIAGTV TVIDTETRQP LKTISFKIAG VTPEKVQPVG
IRIDPDRRYA YVALGPANRV AVVDAQKLEV KDYLLVGQRV WNLEFSPDFG RLYTTNGLSN
DVSIIDLASH KVTKSVAVGS HPWGVAVRP