Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA1277 |
Symbol | |
ID | 3104798 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | - |
Start bp | 1360555 |
End bp | 1361994 |
Gene Length | 1440 bp |
Protein Length | 479 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637170455 |
Product | outer membrane protein TolC, putative |
Protein accession | YP_113739 |
Protein GI | 53804365 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.271455 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAGC CCGCGTTTGC CGCTTTATTG CTGTCACTTT TGGCGCCAGC CGCTTCCGCC GTCGATCTGC TCGGCGTATT CGATCTCGCA CTGCAATACG ATCCCCGTCT GCATGCGGCG CAGGCCCAGC GCGACGCGGC GCTCGAGAAC AAGCCGCAGG CCGTGGCCCG GCTGCTGCCG ACGGTGTCCG CCACCACCGG ACTGACCCGA CAGATGGTCC AGACCGGTGA CTCGCCCATC CTGGTGTTCA ACGCCAAAAA GAACGTCGGT TTCTGGCTGG CGACCGGCAT CGTGCAGCTG GTGCAGCCTA TCTACCAGCA CGACCTGTGG GTGCGGCTGG CCCAGGCCGA CAATGCGGTG GCCGAAGCCG AAGCCCTCTA CGCGGCGGAA CTGCAGAGCG TGATGCTACG GGTGACCCAG ACCTATTTCG AGGTCCTGTA CAAGGAAGCG TCGCTGGACT TCGCCAGGGC CGAACTGGAG TCGATCAATC GGGAGCTGGA GCAGGCCAAT GCCCGCTTCG AGGTCGGCCT GTCGGCGGTG ACCGACGTGA ACGAGGCGCA GGCGGCGGCG GACAGGGCGC GGGCGGGCGT CATCATCGCC GAAAACGAGC TGAACAACGC CCGGGAGCAT CTGCGCCAGA TCGTGGGTGA CGATCCGGGC GAGCTGGAAC CGCTGAAGCT CGAAGTGCCG TTGGAAGATC CAATGCCGGA CGACATCGAG CGCTGGAACG ACACCGCCCA GCAGAGTGCG CTGACCATCA TCGCCGCGAC CAACCGGGCA GACCGGGCCA AACAGGAAAT CGAGGTGCAG TTCGCCGGGC ACTATCCTTC GATCAACCTG ATCGCCGATG CCCAGTTCTA TGACAATGAC CGGCCGCCCC GCCCCAACCG CTACCAGCAG CAGGACGTGG GCATGCAGAT CAACGTGCCG CTGTTCGCGG GCGGCGGGGT CAATTCCCGG GTCCGGCAGG CGCGCTTCGG CTTCGAAGCC GCCATCCAGC AGCTGGACCA GGAGCGCCGC GCGGTACGCA CCAGGGTGAA GAATGCCTAT CGGGCCATCC GCTCCGCCAT CGGCCAGGCC AAGGCCTTCA AAACCGCGAT CAAATCGTCG GAAAGCGCAC TGGAGGCCGC CATCGCCGGC ATGGAGGTCG GCACCCGCAC CATGACGGAC GTGCTGTTCG TACAGCGCCA GTATTACCAG AACAAACGCG ACTTCGCCCT GGCCCTGCGC GACTACATCG TCAACAGCGT CGCGCTGAAG GAAGCCGCCA GCGTCATGCA GCGCGAGGAC CTGGACCGGA TCAACGGCTG GCTACAGGCC CCGCCCGCAG CGCCGGCGAA GGACGGGACC GGAGCCGCGC CCATGCAACC GGGATCCGGG CCGGTCCGCA AGGCCGGCCG AGGCGCCCCG GCGCCAAGCG CTCCGAATCT TCACCGCTGA
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Protein sequence | MNKPAFAALL LSLLAPAASA VDLLGVFDLA LQYDPRLHAA QAQRDAALEN KPQAVARLLP TVSATTGLTR QMVQTGDSPI LVFNAKKNVG FWLATGIVQL VQPIYQHDLW VRLAQADNAV AEAEALYAAE LQSVMLRVTQ TYFEVLYKEA SLDFARAELE SINRELEQAN ARFEVGLSAV TDVNEAQAAA DRARAGVIIA ENELNNAREH LRQIVGDDPG ELEPLKLEVP LEDPMPDDIE RWNDTAQQSA LTIIAATNRA DRAKQEIEVQ FAGHYPSINL IADAQFYDND RPPRPNRYQQ QDVGMQINVP LFAGGGVNSR VRQARFGFEA AIQQLDQERR AVRTRVKNAY RAIRSAIGQA KAFKTAIKSS ESALEAAIAG MEVGTRTMTD VLFVQRQYYQ NKRDFALALR DYIVNSVALK EAASVMQRED LDRINGWLQA PPAAPAKDGT GAAPMQPGSG PVRKAGRGAP APSAPNLHR
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