| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA1237 |
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| Symbol | |
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| ID | 3103614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | - |
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| Start bp | 1302192 |
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| End bp | 1304330 |
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| Gene Length | 2139 bp |
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| Protein Length | 712 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637170416 |
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| Product | sensory box protein |
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| Protein accession | YP_113700 |
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| Protein GI | 53804441 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.267434 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAACGA TGCGCAAGCA CGTCTCAACA TCCTGGAAGT GCAGGCCGAC ATCTGAATCG
GATCGTACCA AGGCCGGCTG TGGTGGTGAG GGCGCTACAA TACAATTGGC TTATTCAAGG
AATCGCCCGA TAGACATGGG AGCGGCTGTC GGCAACACAG ACGCCCATCC ATCCGATAAT
CCCGAACCGC AAGAGCAGAA AAACAGGAAT TTTAGAGTGA CGCTCATCAT TCTCTTGGGA
AAATACCTGT GGATAGCCGG CATTCTGGCC TCTGTCGTGA TGTCCGAAGC CGTGACCGCA
GCGATGGGGC TGCTCTTCAA AGGTGAAGTC ACCTACGACT ACCTGGCCAC AGGAATGGTG
GCTGCACTTT TCGTATCAGC CATCATGGTC ACCGCGATCA TGAAAATGGA GGAGCTGGAA
CGGCGGCGCC AGGAGGAAGT GGCCAAGAAC CGGGCGCTCC GTGCCAGCGA ACGGCGCTAC
CGCACCTTGA TCGAGGTCGC CAGCGACGCC ATCCTCGTCA CCGATTCCGA GACAGGAACC
CTGGTCGACT GCAACCGTCA GGCCGAAACA CTGCTGGGAA TGTCCCGCAA CGAAATCATC
GGCCGGCACC TGTGCAATCT CCAGCAAACC GGTAACGATG CCGATGGTGC AGAAACGGAT
CTCCTCGGCC ACATGCTGCG GGGCAAAACC GGGACCATCG AGCTGTCGCT GGTCAGGGCC
GACGGCACCA CCGTGCCGGT GGAAGTCAGT AGCAGCACCT TCGAAATGGA CGGGCGACGC
TACGTCCACG GCGCATTCCG CGACATCACC CAGCGCAGGG AAGCGGAAGA CCGGATCAAA
CATCTCGCTC ATCACGACCC GCTCACCAAC CTGCCCAATC GTGTCTTCCT GCACGGACGC
CTCGAACAGG CGATTGAACT CGCCCGGCGG GAACAGAATC AGGTCGCGGT GATGTTCATC
GACCTGGACA ATTTCAAGAG AATCAACGAT ACCCTGGGAC ACCGGATCGG CGATGCGCTG
CTGGAACAGG TTGCGGCGCG CCTGACCGAA AACGTCCCCG GCAGCCAGGT GGTGGGACGA
CTGGGCGGCG ACGAATTCAT CGTCGTGATC ACCGGCAACA GGGTTTCGAC GACTTCAGCC
GCCATGGCGG AACGAATCCT GGAAAGCCTT TGCCGCCCCT ATACTGTCGA AGACTATCAG
CTGCACTCCG GCGCAAGCAT AGGCATCGCC ATTTACCCAG CCGACGGAAA CAGCGCTGAG
ACACTGATGA AACATGCGGA CGCCGCGATG TACCATGCCA AATCGCGGGG ACGCAACACC
TTCGAGTTCT TCAGTCAGGC CATCAACCGC GGCGTTCGGG AGCGGCTCGA CATCGAAAAC
GGCCTGCGCG ACGCACTGAA GCACGGCGGC TTCAAACTCC ATTACCAACC CCAGATCGAT
CTGACCACCG GCTCCATCTG CAGCGTCGAG GCGCTGCTGC GCTGGCGCCA CCCGCTGCTC
GGAGTCATCG CTCCCGACCG GTTCATACCC ATCGCCGAAG AGACCAAACT CATCCTGCCT
TTGGGACTGT GGGTCATCGA CCGGGCATGC CATCAGCTGC GAGCCTGGCG GAACGACGGT
ATCGCGGGCG TGCGCATGGC CGTCAACGTT TCGGTGAAGC AGTTGCAGGA CGAGTCGTTT
TTCGAAGCCC TGGGCTCCAT CGTCGAACGC CATGGCCTGT CCGGCTCTGA TATCGAACTC
GAAATCACCG AGTCCGCCAT CATGGAAAAT CTCAGCCGGG TTCAGGCTTT GTTGAAATCG
CTTCAGGATT ATGGAATCAC GCTCTCCATC GACGATTTCG GCACCGGCTA TTCCTCATTG
GGACGCCTCA AACTATTACC CATTCAGAGT CTGAAAATCG ATCGCTCCTT CGTTCACGAC
ATCGAAACCG ATCACGGCAA TGCCAAGATC TGCGACGGCA TCATCGCGCT CGGCCACAGC
CTTGGACTGA AAATCATCGC CGAAGGCGTG GAAACCGACG CCCAGAAAAA CCTGCTGCAA
AACTCGGGTT GCGATGCCAT CCAAGGCTTT CTCATTGCCA AACCGCTGCC TGCGGATGAT
GTCGCCAAAC TGATAACGCA AGTAAATGGG ATGACTTGA
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| Protein sequence | MGTMRKHVST SWKCRPTSES DRTKAGCGGE GATIQLAYSR NRPIDMGAAV GNTDAHPSDN
PEPQEQKNRN FRVTLIILLG KYLWIAGILA SVVMSEAVTA AMGLLFKGEV TYDYLATGMV
AALFVSAIMV TAIMKMEELE RRRQEEVAKN RALRASERRY RTLIEVASDA ILVTDSETGT
LVDCNRQAET LLGMSRNEII GRHLCNLQQT GNDADGAETD LLGHMLRGKT GTIELSLVRA
DGTTVPVEVS SSTFEMDGRR YVHGAFRDIT QRREAEDRIK HLAHHDPLTN LPNRVFLHGR
LEQAIELARR EQNQVAVMFI DLDNFKRIND TLGHRIGDAL LEQVAARLTE NVPGSQVVGR
LGGDEFIVVI TGNRVSTTSA AMAERILESL CRPYTVEDYQ LHSGASIGIA IYPADGNSAE
TLMKHADAAM YHAKSRGRNT FEFFSQAINR GVRERLDIEN GLRDALKHGG FKLHYQPQID
LTTGSICSVE ALLRWRHPLL GVIAPDRFIP IAEETKLILP LGLWVIDRAC HQLRAWRNDG
IAGVRMAVNV SVKQLQDESF FEALGSIVER HGLSGSDIEL EITESAIMEN LSRVQALLKS
LQDYGITLSI DDFGTGYSSL GRLKLLPIQS LKIDRSFVHD IETDHGNAKI CDGIIALGHS
LGLKIIAEGV ETDAQKNLLQ NSGCDAIQGF LIAKPLPADD VAKLITQVNG MT
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