Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA1229 |
Symbol | tolB |
ID | 3103943 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | + |
Start bp | 1295268 |
End bp | 1296542 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637170407 |
Product | translocation protein TolB |
Protein accession | YP_113693 |
Protein GI | 53804448 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.910184 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAAGG CGCGTGCGAT CGCCCGTTGG ATCTCGTTCC TGTTGCTCAT CGCCGCGGGT CAGGTCTGTG CGGAACTCCA GGTTCAGATC AGCCAAGGGG TGGAAGGGGC GATTCCGGTG GCCGTCGTTC CCTTCGCCAA CCAGGGAAGC TTGAGCGACT CTCTCAGCCA GATCGTGTCG GCCGACCTGC AGCGCAGCGG GCGATTCAGA ACCTTGGCGG AAAGCGCCAT GCAGGAGCGG CCGACGGCGC CGGACCAGGT TCAGCAGGCG GCATGGCAGG CTTTGGGCCA GGATTTCGTC GTGGTGGGCC AAATCCGGCC GTCCGGCGAC GGCTACGAAG CCGATTTCCA TGTCGTCGAC GTCATCCGTG GCACGCTGGT CGTCAGCTAC AGATTGCCCT TCGGAAGAGC CGAAACCCGC CAAGCCGCCC ATCGGATCGC CGACGTCATC TATAAGGCCA TCACCGGTGA GCCCGGCGCG TTCGCCACGC GCGTCGCTTA TGTCAGCGTG TCGGGTGAGG GCGCCAACCG GCGCTACAAC CTGCAGGTGG CGGACACGGA CGGCTACAAC CCGCAGAGCG TCATCGTCTC GAACGAGCCG ATTATGTCGC CGGCCTGGTC GCCCGACGGT ACCAAGATCG CCTACGTTTC GTTCGAAAGC CGCAGGTCGG CGATCTACGT TCAGACGCTG GCTACCGGCG AGCGCCGCAA GGTGTCGGAT GCTCCGGGTA TCAACGGCGC GCCGGCGTTC TCGCCGGACG GATCGCGGCT GGCGCTGACC TTGTCGAAAG ACGGCAATCC CGATATCTAC GTCATGAACC TGGGATCGGG CGGGCTCACC AGGATCACCG ATTACAGCGG GATCGACACC GAACCGAACT GGTCACGGGA CGGCCGTTCC ATCGTGTTCA CTTCCGATCG CGGTGGCAAA CCCCAGCTGT ATCTGGTGTC GGCAAGCGGG GGACCGGCCG AACGGCTGAC GTACGAAGGG GATTACAATG CCCGCGGTGT GTTCTCGCCG GATGGTCGCA GCCTCGCCAT GGTGCACGGC AAGGGCGGCG ATTACCGGAT CGCAGTCATG GATCTGGCCA GCCGTGCGGT TCGGGTTTTG ACCAGCGGTC CTTTGGACGA ATCCCCGGGC TTCGCTCCCA ACGGCAGCAT GATTTTGTAC GCGGCGCGCC GGGGCCAGCT GGCGGCGGTT TCCATCGACG GCAAGGTCCG TCAGAGTCTG CGGATCGAGG GGGGCGCCGT GCGGGAGCCC GCGTGGTCGC CTTGA
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Protein sequence | MNKARAIARW ISFLLLIAAG QVCAELQVQI SQGVEGAIPV AVVPFANQGS LSDSLSQIVS ADLQRSGRFR TLAESAMQER PTAPDQVQQA AWQALGQDFV VVGQIRPSGD GYEADFHVVD VIRGTLVVSY RLPFGRAETR QAAHRIADVI YKAITGEPGA FATRVAYVSV SGEGANRRYN LQVADTDGYN PQSVIVSNEP IMSPAWSPDG TKIAYVSFES RRSAIYVQTL ATGERRKVSD APGINGAPAF SPDGSRLALT LSKDGNPDIY VMNLGSGGLT RITDYSGIDT EPNWSRDGRS IVFTSDRGGK PQLYLVSASG GPAERLTYEG DYNARGVFSP DGRSLAMVHG KGGDYRIAVM DLASRAVRVL TSGPLDESPG FAPNGSMILY AARRGQLAAV SIDGKVRQSL RIEGGAVREP AWSP
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