| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA1227 |
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| Symbol | tolR |
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| ID | 3104753 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | + |
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| Start bp | 1293405 |
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| End bp | 1293845 |
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| Gene Length | 441 bp |
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| Protein Length | 146 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637170405 |
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| Product | tolR protein |
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| Protein accession | YP_113691 |
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| Protein GI | 53804466 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0848] Biopolymer transport protein |
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| TIGRFAM ID | [TIGR02801] TolR protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.165973 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACGTCT CGACCGGAGC CGGACGCGGC AACCGCAGGC GTCCCATGGC CGAAATCAAC
GTCGTACCCT ACATCGACGT CTCGCTGGTG CTGCTCATCA TCTTCATGGT GACCGCACCG
ATGCTCCAGT CCGGCGTCGA CGTCGACTTG CCCAAGGCGG AGGCGAGGCC GATCGACCCG
AATCAGGACA AACCGATCAT CGTCACCATC GACAAGGACG GCCAGCTCTA CCTGGATGCG
ACCAACCAGG AAGACGTTCC GGTCGACCCC GCCGCCCTGA CTGAGAAGGT GACCCGCGCC
CTCGCTGAAA AACCAGGCAC CGCCGTCCTG ATCCGGGGCG ATCGGGCCGT GGATTACGGG
CGCGTGATCA CCGTGATGGC CGCGCTCAAA AACTCCGGCG TGCCGCAGGT CGGACTGATG
ACGAATCCCG TCGAAGATTG A
|
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| Protein sequence | MNVSTGAGRG NRRRPMAEIN VVPYIDVSLV LLIIFMVTAP MLQSGVDVDL PKAEARPIDP
NQDKPIIVTI DKDGQLYLDA TNQEDVPVDP AALTEKVTRA LAEKPGTAVL IRGDRAVDYG
RVITVMAALK NSGVPQVGLM TNPVED
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