Gene MCA1224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCA1224 
Symbol 
ID3103326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylococcus capsulatus str. Bath 
KingdomBacteria 
Replicon accessionNC_002977 
Strand+ 
Start bp1288929 
End bp1289360 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content62% 
IMG OID637170402 
Productthioesterase family protein 
Protein accessionYP_113688 
Protein GI53804469 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID[TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family
[TIGR02799] tol-pal system-associated acyl-CoA thioesterase 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.0347226 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAACGA GGAACTGTTC GGCGATGAGT GAAGAATTCG GCTGGCCGGT GCGGGTCTAC 
TACGAGGACA CCGATGCCGG CGGCGTGGTT TATTACGCCA ATTACCTCAA ATACATGGAG 
CGTGCCCGTA CCGAATGGCT GCGCGCGCTG GGATTCGAGC AAGACAGTCT GCGCGAGGAA 
CTGGGCGTGA TCTTCGCCGT ACGCTCGGTC CAGGTCGATT ATCTCAAGCC CGCCCGGTTC 
AACGACGCCT TGAGGGTCAG CGCGGATCTG GTCGAAGCAC GGCCGGCAAG TTTCAGTTTC 
GTGCAGCGCG TGATGAGGGG CGACGTCACG TTGTGCGAGG GGCGGGTCGG CATCGTCTGT 
CTGGCCGCGG ACAGTTTCCG GCCGCAGGCC TTGCCGGCCG CCTTACTGAA ACGGCTGAGG 
GGTGAAGGCT GA
 
Protein sequence
MSTRNCSAMS EEFGWPVRVY YEDTDAGGVV YYANYLKYME RARTEWLRAL GFEQDSLREE 
LGVIFAVRSV QVDYLKPARF NDALRVSADL VEARPASFSF VQRVMRGDVT LCEGRVGIVC 
LAADSFRPQA LPAALLKRLR GEG