| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA1217 |
|---|
| Symbol | |
|---|
| ID | 3102114 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylococcus capsulatus str. Bath |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002977 |
|---|
| Strand | + |
|---|
| Start bp | 1281500 |
|---|
| End bp | 1284019 |
|---|
| Gene Length | 2520 bp |
|---|
| Protein Length | 839 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637170396 |
|---|
| Product | metalloprotease, putative |
|---|
| Protein accession | YP_113681 |
|---|
| Protein GI | 53804484 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3227] Zinc metalloprotease (elastase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000727805 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTATCCC CGAATTCCTT GAGAAAGATA CGGCTCTTCG TCATATTTTT GATTTTGTCA
GTTTTCGTTT CGGCCAACAT GGCCGCTCAT GCCGCGCAAT CAGAGGACAT CCCCCGTAAC
TTCGATGCCC GCGAGGACTA CAACCGTGGT TTTCGGGCGA AGCAGAGCAG TGACCAGGAG
ACTGCAGAAA AGAACCTGCG CCAACGGGTG AAGGATGCGG AGGTTGAATA TTCCACGGCA
AGAGGTACAG CCCGCCGAAT CCGGCGATTC GTCGGGCCGT TCGACGGGGC GCAACCCGGA
TATCAACCTG TCACCCGTGC CCGTAAATTT CTCGACGACT ACCGGCAGTT GCTCGGGTTG
ACCGCACAAG ACGACGCGGA TCTCGAAGTG ACGGATGAGG TGGTCAGCCG GGACAACGGT
GCCAGTCACG TCTATCTGCG GCAACGGCGG CAAGGCATAC CCGTTTATGA CGGCCAGTTG
CAGGTCGATA TCGACGGAGA AGGCCGGCTG CAGTCCATCA GCAACAACGG TATGCGGGGT
TTGGCCGCCT CGCTCGCTTT CACCAGGCCC ACATTGTCGG CGAGTCAGGC CGTTACGGCG
GCAGCCCAGC ACCTGGGCAT TTCGACTCAA ACTCCACCCG AGGTTTTCGA GTCAGGCACG
GATCCTCAAC AGACGACGCG GCTCACCGAG CCCGAATTGT CCACCGAAGA CATAGTGATG
CGGCTGATGT GGCTGCCGAT CAGGGACAAG CTCACGCGTC TGGTCTGGAA TTTCCAGATT
CACACACCCG ATGGCCAGCA TGTCTACGAC TTTACGGTCG ATGCCAAGTC CGGGAAAGTC
TGGACGCGAT TCGACTGGAT AGCCTCGGCC AATTACCAGG TCTATCCGCA GCCGTTTGAA
AGTCCGGATC AGGCTTCGCC AGCACCGCCG CTCGACGGGC GCCAGACTCT GAGCAACCCG
GCGGATCCCC TGGCGTCTCC GCTGGGCTGG CACGACACGG GTTCGGCCGC TTACACGGCT
TTGCGCGGCA ATAATGTGTA TGCCTATCTG GACGTACTTG GTTTTAACTC TCCCACGGGA
GCGCAGCCGG ATTGCGGCGC GTCCCTGACC TGCGCTTTTC CAATGGATCT CTCTCTGTCT
CCGGCGAATT ACAGATCGGC CGCCGCGACC AATCTGTTCT ATTGGACGAA TCTGGCACAC
GACATCTTTT ACCGTTACGG CTTCGACGAG GCAAACGGTA ATTTCCAAAT CAACAATTTC
GGAAAGGGTG GCGCTGGCAA CGATTATTTG CGGGCTGAAG CGCAGGACGG CGGCGGTTCC
TGCAACGCCA ACTTTTTGAC GCCTGCGGAT GGGAGTCCGC CGCGCATGCA GCTCTACGTA
TGCAGCAGGG CCATCGACGG TTCGAGCTTT TTTCCTGCGC ACGACGCGGA TCTGGAAGGG
GCCGTCATCG TGCATGAGTA TGGCCATGGC GTGACGAATC GGCTGGTCGG TGGACCCTCG
AATGTTTCGT GCCTCAATAA CGATCAGCAA CCTGGAGAGG GTTGGAGCGA TTTCTTCGGG
CTCGTTTTCA CGGTTCGCCC GGGAGACAGC GGAACCATGA AACGAGGCTT CGGAAAATAT
TTGTTCGGCC AGCCCCCGGA CGGGAACGGG ATTCGGCCCA AACCCTACAG TACCGATTCA
GCCATCAATA ACTTCAACTA TGCGTCCATC AATGGCTTGG CGGTCCCGCA TGGCGTAGGT
TCGGTTTGGG CGGAAGTGCT GTGGCGTATG TATTGGCGGT TGGTCGATGC CCACGGCTCA
AGCGCCGATC TTGCGGATCC GCCTGCCCTG TCGAATGCCG CCGCATGGGC GGGCAATCAA
AGGGCGCTGC TCTATGTAGT GGACGGTCTC AAATACACTG CCTGTTCTCC CACTTTTGTC
GATGCGCGGG ACGGCATTAT TGCATCGGCC GCGGCCCATT TCGGTGGTGA GGATGTCTGC
ATGATCTGGA ATACGTTTGC AGCGTTCGGT TTGGGTACCA ACGCCGTGCC GGGCGGCGCA
AACAGCACGA CGCCGGCCAA TGGATTTGCC GTGCCGGCAA GCTGTTCCGG AAGCCCGAGC
CCGAGCCCGA GTCCGAGTCC GAGTCCGAGT CCGAGTCCGA GTCCGAGTCC GAGTCCGAGC
CCGAGCCCGA GTCCGAGTCC GAGTCCGAGC CCGAGCCCGA GCCCGAGCCC GAGCCCGAGC
CCGAGCCCGA GCCCGAGTCC GAGCCCGAGC CCGAGTCCAG CACCCACGGC TTACACTCTT
TCGGTTACCA AAACCAATTC CAGCAGGGGA GCGGTAAATA GTTCGCCTTC AGGGATCAGT
TGCGGGACTT CTTGCAGTTC CGCAAGCGCG TCGTTCGCTT CAGGATCGAT GGTCACATTG
ACGGCATCGC CATTCATATT TCGGAAATTT ACTGGCTGGA GCGGTGACTG TACGGGCACC
AGCAGGACCT GCACCGTACT GATGGACAGG GCGAGGACTG TCAACGCCAC TTTCCAATAG
|
|---|
| Protein sequence | MLSPNSLRKI RLFVIFLILS VFVSANMAAH AAQSEDIPRN FDAREDYNRG FRAKQSSDQE
TAEKNLRQRV KDAEVEYSTA RGTARRIRRF VGPFDGAQPG YQPVTRARKF LDDYRQLLGL
TAQDDADLEV TDEVVSRDNG ASHVYLRQRR QGIPVYDGQL QVDIDGEGRL QSISNNGMRG
LAASLAFTRP TLSASQAVTA AAQHLGISTQ TPPEVFESGT DPQQTTRLTE PELSTEDIVM
RLMWLPIRDK LTRLVWNFQI HTPDGQHVYD FTVDAKSGKV WTRFDWIASA NYQVYPQPFE
SPDQASPAPP LDGRQTLSNP ADPLASPLGW HDTGSAAYTA LRGNNVYAYL DVLGFNSPTG
AQPDCGASLT CAFPMDLSLS PANYRSAAAT NLFYWTNLAH DIFYRYGFDE ANGNFQINNF
GKGGAGNDYL RAEAQDGGGS CNANFLTPAD GSPPRMQLYV CSRAIDGSSF FPAHDADLEG
AVIVHEYGHG VTNRLVGGPS NVSCLNNDQQ PGEGWSDFFG LVFTVRPGDS GTMKRGFGKY
LFGQPPDGNG IRPKPYSTDS AINNFNYASI NGLAVPHGVG SVWAEVLWRM YWRLVDAHGS
SADLADPPAL SNAAAWAGNQ RALLYVVDGL KYTACSPTFV DARDGIIASA AAHFGGEDVC
MIWNTFAAFG LGTNAVPGGA NSTTPANGFA VPASCSGSPS PSPSPSPSPS PSPSPSPSPS
PSPSPSPSPS PSPSPSPSPS PSPSPSPSPS PSPAPTAYTL SVTKTNSSRG AVNSSPSGIS
CGTSCSSASA SFASGSMVTL TASPFIFRKF TGWSGDCTGT SRTCTVLMDR ARTVNATFQ
|
|---|
| |