| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA1210 |
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| Symbol | |
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| ID | 3103144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | - |
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| Start bp | 1271086 |
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| End bp | 1274286 |
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| Gene Length | 3201 bp |
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| Protein Length | 1066 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637170389 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_113674 |
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| Protein GI | 53804499 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01553] formate dehydrogenase, alpha subunit, proteobacterial-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGTCA CCCGGCGCCA GTTTTTCAGA CTGAGTGCCG CAACGCTCGG GGGTTCCTCG
CTGGCCGTCA TGGGATTTTC GCCCCGGGAG GCGCTGGCGG AAGTGCGGCA GTTCAAACTG
GCGCGCACGA CGGAAACCCG CAATACCTGC CCGTATTGCT CGGTAGCCTG CGGTCTCATC
ATGTACAGTC TGGGCGACAA GGCCAAGAAC GCCAAGGCGG AAATCATACA CATCGAAGGC
GACCCGGATC ACCCGGTCAG CCGCGGCAGT CTCTGCCCCA AGGGGGCGGG ACTGCTGGAT
TTCGTCCGCA GCCCCTCGCG CCTCAAATAC CCGGAATACC GCGCCCCCGG CAGCGACGCA
TGGAAGCGCG TCTCCTGGGA CTGGGCCCTC GAACGCATCG CCCGCCTGTT GAAAGAGGAC
CGTGACCGGA ACTTCATCGC CAGGAACGAG CAGGGCCAGA CGGTCAACCG CTGGACCTCG
CTGGGCTTTC TGGCCGCATC CGCCGGCTCC AACGAAACCG GCTACCTGAC CAACAAGATC
GCCCGCGCCC TGGGGATAGT CATGCTGGAC AGTCAGGCCC GCATCTGCCA CGCGCCGTCC
GTATCGGCCC TGGCATCCAG CTTCGGCCGC GGCGCCATGA CCAACACCTG GATGGACATC
AAGAACGCCG ACGTCATCCT GGTGATGGGC GGCAACCCGG CCGAGGCCCA TCCGGTGGGC
TTCAAGTGGG CCATCGAAGC CAAGGCCAGG AACAAGGCCA GACTCATCGT GGTGGACCCG
CGCTTCAACC GCACGGCGGC GGTGGCCGAC TTCTACGCCC CCATCCGCGC CGGTACCGAC
ATCGCATTCC TCAACGGCGT GATCCGCTAT CTGCTGGAGA AGGACGCGAT CAACCACGAA
TACGTCCGGG CCTACACCAA CGCATCCTTC ATCGTGCGGG AGGATTTCCG CTTCGAGGAC
GGCCTGTTCA GCGGCTACGA CGCCGGCAAG ACCGAGCAGC ACTACGACCG CAGCACCTGG
ACCTATGAGC TGGACGAGCA CGGCTACGCC AGGATCGACC CGACGCTCCG GCATCCCCGC
TGCGTGTTCC AGTTACTGAA GACCCACGTC GAACGCTATA CGCCGGACAA GGTGACCGAG
CTGACCGGCA CGCCCACGGA CGCCTTCTTG AAAATCTGCG ACCTGATCGC CTCCACCGCC
GTGCCCGACC GCACCCTCAC CAGCCTCTAC GCCCTCGGCT GGACCCACCA TTCGGTGGGC
GTGCAGAACA TCCGCGTCAT GGCCATGATC CAGCTCCTGC TGGGCAACAT CGGCGTCTCC
GGCGGCGGCG TCAATGCCTT GCGCGGCCAT TCCAACATCC AGGGACTGAG CGATCTGGGA
CTGCTCACCG ACATGCTGCC CGGCTACATC ACCCTGCCCA AGGACGGCGA AACCAGCCGC
GCCGTCTACC TGGAAAAACG CACGCTCAAA CCGCTGCGGC CGGGCCAGCT CAGTTACTGG
TCGAACCTGC CCAAGTTCCA CACCAGCCTG ATGAAAGCCT GGTACGGCAA GGCGGCCACC
CGGGACAATG ACTACTGCTA CGACTGGCTG CCCAAGCTGG ACAAGCCCTA TGACAGCCTG
CGCATGTTCG ACCTGATGGC CCAAGGCAAG GTCAACGGCT TCATCTGCCA GGGCTTCAAC
CCGCTGGCCT CGTATCCCGA CAAGGGCAAG ATCGCCACCG CCCTCGCCCG CCTGAAATTC
CTGGTCGTCA TGGATCCCTT GGCCACCGAT ACTTCCGTCT TCTGGCAGAA CCACGGCGAG
TACAATCCGG TGAATCCCGC CGACATCCAG ACCGAAGTGT TCCGCCTGCC GACCACCTGC
TTCGCCGAGG AGGACGGCTC CCTGGTCAAC AGCTCCCGCT GGCTGCAATG GCACTGGAAG
GGCGCGGAAC CGCCCGGAGA AGCGCGCAAC GACATTGAAA TCATGTCCGC TCTGTACCTG
CGTTTGCGCG AAATGTACGA AAAGGAAAGC GGCGCTTTCC CCGATCCCAT CCTCAATCTG
CACTGGCCCT ACCAGAAACC GGAGGAGCCC ACGCCGGAAG AACTGGCCAG GGAATACAGC
GGCTACGCCG TGGCCGACGT CGCCGATCCC AAGGACCCGA GCAAGGTATT GGTCAAGGCC
GGCCAGCAAC TGGCCGGCTT CGCCCAGTTG CAGGACGACG GCAGCACCGC CTGCGGCAAC
TGGATTTTCA GTGGCGCCTT CACCGAAGCC GGTAACCAGA TGGCGCGCCG TGACACGTCC
GATCCCACCG GTTTGGGGAT CGCTCCAGGC TGGGCCTGGG CCTGGCCGGC CAACCGGCGC
ATCCTCTACA ACCGCGCCTC CTGCGATCCG GACGGCAAGC CCTGGAACGA AAAACGTCCC
ATCATCCACT GGGACGGCAG CCGCTGGACC GGCCTGGACG TGCCTGACTA TAAGGCCGAC
GTCCCGCCGG GCAGCGACAT GTCGCCTTTC ATCATGAACC CGGAAGGGGT GGGCAGGCTG
TTCGGCGCCG ACCGGCTGAC CGACGGCCCC TTCCCCGAGC ATTACGAGCC CTACGAAACG
CCCCTGGACA CCAATCCGCT GCATCCCAAG GTGGTCAGCA ACCCGGCGGC GCGGGTGTTT
CCCGGCGACA AGGCCATGCT GGGCGGCAAG GACGACTTCC CCTACGTCGC CACCACCTAC
CGCCTCACCG AACTCTTCAA CACCTGGACC GACCACGTGC GCATCAATGC CTCGCTGCAA
CCGGAGCAGT TCGTGGAAAT CGGCCAGGAA CTGGCGCGGG AACTGGGCAT CGCCAATGGC
GAAATCGTCA CCGTGCGCTC CAGACGCGGC TTCATCAAGG CCGTCGCCAT GGTCACCAAG
CGCATCAAGC CGCTGACGGT GGCGGGCCAG ACCGTGCACC AGATCGGCAT CCCGGTCCAC
TGGGGCTTGC AGGGCCAGAC CCGCAAAGGC TTTTTCGCCA ACAATCTGAC GCCTTACCTG
GGCGACGCCA ATACCCAGAC CCCCGAATAC AAGGCGTTCC TGGTCAAAGT CGAAAAAGAC
CTGTCCGAAC CCGGACCGCA TACCCAAAAA CGGGGCGAAG CTCAGGAAGG GCGCAGGCGC
TCCGGCGGCA ACGGAACTGC GGGTGCGACC GAGAAGTCGT CCTGGCTGAC GCGCGTCCTC
AAAGGGCGGC TGGAGGTTTG A
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| Protein sequence | MQVTRRQFFR LSAATLGGSS LAVMGFSPRE ALAEVRQFKL ARTTETRNTC PYCSVACGLI
MYSLGDKAKN AKAEIIHIEG DPDHPVSRGS LCPKGAGLLD FVRSPSRLKY PEYRAPGSDA
WKRVSWDWAL ERIARLLKED RDRNFIARNE QGQTVNRWTS LGFLAASAGS NETGYLTNKI
ARALGIVMLD SQARICHAPS VSALASSFGR GAMTNTWMDI KNADVILVMG GNPAEAHPVG
FKWAIEAKAR NKARLIVVDP RFNRTAAVAD FYAPIRAGTD IAFLNGVIRY LLEKDAINHE
YVRAYTNASF IVREDFRFED GLFSGYDAGK TEQHYDRSTW TYELDEHGYA RIDPTLRHPR
CVFQLLKTHV ERYTPDKVTE LTGTPTDAFL KICDLIASTA VPDRTLTSLY ALGWTHHSVG
VQNIRVMAMI QLLLGNIGVS GGGVNALRGH SNIQGLSDLG LLTDMLPGYI TLPKDGETSR
AVYLEKRTLK PLRPGQLSYW SNLPKFHTSL MKAWYGKAAT RDNDYCYDWL PKLDKPYDSL
RMFDLMAQGK VNGFICQGFN PLASYPDKGK IATALARLKF LVVMDPLATD TSVFWQNHGE
YNPVNPADIQ TEVFRLPTTC FAEEDGSLVN SSRWLQWHWK GAEPPGEARN DIEIMSALYL
RLREMYEKES GAFPDPILNL HWPYQKPEEP TPEELAREYS GYAVADVADP KDPSKVLVKA
GQQLAGFAQL QDDGSTACGN WIFSGAFTEA GNQMARRDTS DPTGLGIAPG WAWAWPANRR
ILYNRASCDP DGKPWNEKRP IIHWDGSRWT GLDVPDYKAD VPPGSDMSPF IMNPEGVGRL
FGADRLTDGP FPEHYEPYET PLDTNPLHPK VVSNPAARVF PGDKAMLGGK DDFPYVATTY
RLTELFNTWT DHVRINASLQ PEQFVEIGQE LARELGIANG EIVTVRSRRG FIKAVAMVTK
RIKPLTVAGQ TVHQIGIPVH WGLQGQTRKG FFANNLTPYL GDANTQTPEY KAFLVKVEKD
LSEPGPHTQK RGEAQEGRRR SGGNGTAGAT EKSSWLTRVL KGRLEV
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