Gene MCA1165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCA1165 
Symbol 
ID3104235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylococcus capsulatus str. Bath 
KingdomBacteria 
Replicon accessionNC_002977 
Strand
Start bp1222207 
End bp1223169 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content56% 
IMG OID637170349 
ProductNAD-dependent epimerase/dehydratase family protein 
Protein accessionYP_113634 
Protein GI53804727 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0499982 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAGACA CCCTTAGAAA GAGAATACTG GTCACGGGGG GAGCGGGTTT TTTGGGCTCG 
CACCTCTGTG AAAGCCTGCT AGGGCTCGGG CATGACGTGT TATGCGTGGA CAACTTCTTT
ACCGGCAGCA GGGACAACAT CCTCCATTTG CTGGGAAACC CGCATTTCGA ATTGCTGCGC
CATGACGTGA CCTTCCCTTT GTATGTGGAG GTTGACGAAA TCTACAATCT TGCCTGCCCT
GCCTCACCGA TTCATTACCA GTTCGATCCG GTGCAGACCA CCAAGACCAG CGTGCATGGC
GCGATCAACA TGCTTGGACT TGCCAAGCGG GTCAAGGCGA AGATTTTCCA GGCCTCGACC
AGCGAGGTTT ATGGAGACCC GGAAGTGCAC CCCCAGACCG AGGATTACGT CGGCCATGTC
AACCCCATTG GGCCGCGTTC CTGCTATGAC GAGGGGAAAC GCTGCGCCGA GACGCTCTTC
TTCGATTATC GGCGCCAGCA CAACCTCAGC ATCAAGGTGG CGCGCATTTT TAATACCTAT
GGCCCAAGGA TGCATCCCAA CGACGGACGG GTGGTTTCCA ACTTCATCGT TCAGGCGCTC
AAAGGCCAAC CGATCACCCT TTATGGCGAT GGTGAACAAA CCCGCTCTTT CTGTTATGTG
AGCGATTTGA TCGAAGGCTT CATCCGCCTG ATGGACAGCC CCGACGATTT CACCGGCCCT
GTCAACCTCG GCAATCCCGG CGAATTCACC ATCCGCCAAC TGGCCGAGAA GATCATCGAG
ATGACCGGTT CCTCCTCGAA GCTGGTCTAT CAGCCGCTGC CCGTCGACGA TCCGCGCCAG
CGCCGCCCTG ACATCACACT GGCCAAGGAG AAACTGGATT GGGAGCCCAC CATCCATCTC
GAAGAAGGTT TGGTTCATAC CATTACCTAT TTCGACGATC TGCTCCAGCG AGGTTTGGCT
TGA
 
Protein sequence
MKDTLRKRIL VTGGAGFLGS HLCESLLGLG HDVLCVDNFF TGSRDNILHL LGNPHFELLR 
HDVTFPLYVE VDEIYNLACP ASPIHYQFDP VQTTKTSVHG AINMLGLAKR VKAKIFQAST
SEVYGDPEVH PQTEDYVGHV NPIGPRSCYD EGKRCAETLF FDYRRQHNLS IKVARIFNTY
GPRMHPNDGR VVSNFIVQAL KGQPITLYGD GEQTRSFCYV SDLIEGFIRL MDSPDDFTGP
VNLGNPGEFT IRQLAEKIIE MTGSSSKLVY QPLPVDDPRQ RRPDITLAKE KLDWEPTIHL
EEGLVHTITY FDDLLQRGLA