Gene MCA1146 details

Gene Information

• Locus tag: MCA1146
• Symbol: gmd
• ID: 3102647
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: +
• Start bp: 1202384
• End bp: 1203502
• Gene Length: 1119 bp
• Protein Length: 372 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 637170331
• Product: GDP-mannose 4,6-dehydratase
• Protein accession: YP_113616
• Protein GI: 53804758
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1089] GDP-D-mannose dehydratase
• TIGRFAM ID: [TIGR01472] GDP-mannose 4,6-dehydratase

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCCGAA AAATCGCTCT CATCACCGGC GTCACCGGCC AGGACGGCGC CTACCTGTCC 
GAATTCCTCC TCGGCAAGGG CTACGAAGTC CATGGCATCA AGCGCCGGAC CTCGCTCTTC 
AACACCGATC GCATCGACCA CCTCTATCAG GACCCTCACG TGAAGGACCG CCGCTTCATC 
CTGCATCACG GCGACCTGAC CGATTCCACC AGTCTGGTCC GCATCATCCA AAAGGTGCAG 
CCGGACGAAA TCTACAACCT GGCGGCCCAG TCCCACGTCG CAGTCAGCTT CGAGGAGCCG 
GAATACACCG CGAATGCGGA CGGCATCGGC GCCCTGCGCA TCCTGGAAGC CATCCGGATC 
CTCGGAATGG AAAAGAAAGC CCGCTACTAT CAGGCGTCCA CCTCGGAACT CTACGGCCTG 
GTGCAGGAGG TTCCGCAGAA GGAAACCACG CCGTTCTACC CGCGCAGCCC GTATGCCGTC 
GCCAAGCTCT ACGCCTACTG GATCACGGTC AATTACCGCG AGGCTTACGG CATCTACGCC 
TGCAACGGCA TCCTGTTCAA CCACGAAAGT CCGGTACGGG GCGAAACCTT CGTCACCCGC 
AAGATCACCC GCGCCATCGC CCGCATCGCG CTCGGCCTTC AGGAGTGCCT CTACCTCGGC 
AATCTGTCGG CCTTGCGCGA CTGGGGCCAC GCCCGCGACT ACGTCGAGAT GCAGTGGCTG 
ATGCTCCAGC AAGACCAGCC CGACGACTTC GTGATTGCGA CCGGGGTCCA GTACAGCGTC 
CGCCAGTTCG TCGACTTCGC CGCGGAAGAA CTGGGAATTT CGCTGGCCTG GGAAGGGGAG 
GGCGAAAGCG AAACCGGCAG AGTCGTGGCC GTATCCAACA AGGACGTCAA GGTGAAAGCC 
GGAGACGTCA TCGTCCGGGT CGATCCCCGC TATTTCCGTC CCACCGAGGT CGAGACTCTG 
CTCGGGGATG CCAGCAAGGC GCGCGAGAAA CTCGGCTGGA GGCCCCAGAC CAGCCTGCGG 
GAACTGGTCA AGGAAATGGT GCAGAGCGAT TACGCGGCCG CGAAGCGCGA TGCCCTCGTC 
AAGATGGCCG GCTTCACCGC CTACGACTAC AACGAGTAG 

 

Protein sequence

MTRKIALITG VTGQDGAYLS EFLLGKGYEV HGIKRRTSLF NTDRIDHLYQ DPHVKDRRFI 
LHHGDLTDST SLVRIIQKVQ PDEIYNLAAQ SHVAVSFEEP EYTANADGIG ALRILEAIRI 
LGMEKKARYY QASTSELYGL VQEVPQKETT PFYPRSPYAV AKLYAYWITV NYREAYGIYA 
CNGILFNHES PVRGETFVTR KITRAIARIA LGLQECLYLG NLSALRDWGH ARDYVEMQWL 
MLQQDQPDDF VIATGVQYSV RQFVDFAAEE LGISLAWEGE GESETGRVVA VSNKDVKVKA 
GDVIVRVDPR YFRPTEVETL LGDASKAREK LGWRPQTSLR ELVKEMVQSD YAAAKRDALV 
KMAGFTAYDY NE