| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA1141 |
|---|
| Symbol | |
|---|
| ID | 3102497 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylococcus capsulatus str. Bath |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002977 |
|---|
| Strand | - |
|---|
| Start bp | 1197500 |
|---|
| End bp | 1198438 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637170326 |
|---|
| Product | hydrogenase subunit |
|---|
| Protein accession | YP_113611 |
|---|
| Protein GI | 53804770 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0650] Formate hydrogenlyase subunit 4 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.887658 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACTGGT TGCTCGCCCT GATCCAGGCC GTGCTGTTCA CGCTGCTGGC GCCGCTGTTT
TCGGGCTGGC TCAAATGGGT CAAGTGCCTG CTGCAGAACC GCCGCCCGCC CCCACCGTGG
CAGCCCTACC GCGACCTGCG GAAGCTGTTC GGCAAGCGCC CGGTGGTCGC CGACACCGCA
TCGTGGCTGT TTCCGGTCAC GCCCTACGTC GTGTTCTGCG CGGCGGCCCT GTCCGGCGCC
ATCGTGCCGT TCTTCGCCGT AGACCTGCCG ACGGCGGCCA TCGCCGACAT GATCGTGCTG
GTGGGCTTCT TCGCCCTGGG CCGGTTCTTC CTGGCCCTGG CCGGGATGGA CGTCGGCACC
GCCTTCGGCG GCATGGGCTC GTCGCGGGAG ATGACCATCG CCTCGCTGGC GGAACCGGCC
ATGCTCATGG CCATCTTCAC CCTGGCGCTG ACCGCCTCCA CCACCAATAT TTCCGTCGCC
ATCGATTATC TGCTGGACAC CGGCCTGGCC CTGCGGCCTT CCTTCCTGTT CGCGTTGGGG
GGGCTGCTGC TGGTGGCGGT GGCGGAAACG GGGCGCATCC CCATCGACAA CCCGGCCACC
CATCTCGAGC TGACCATGAT CCATGAAGCC ATGATCCTCG AATACAGCGG CCGCCATCTG
GCGCTGATCG AATGGGCCGG CCAGATCCGC CTGATGCTGT ACGGCGTGCT CATCGCCAAC
ATCTTCCTGC CCTGGGGACT GGCCCGTGAA TTCACGCCCG AGGCGCTGGG CATCGGGGCC
GCGGCCATCG CGGCCAAGCT CGGCGCACTG GCGGTGGCCC TCGCGCTGGC GGAAACCTCG
GTCGCGAAGA TGCGGCTGTT CCGGGTCCAG GAGTTCCTGG GGTTCGCTTA CCTGCTCAGC
CTGCTCGGCA TGCTGAGCCA CATCATCCTG GAGGTCTAG
|
|---|
| Protein sequence | MDWLLALIQA VLFTLLAPLF SGWLKWVKCL LQNRRPPPPW QPYRDLRKLF GKRPVVADTA
SWLFPVTPYV VFCAAALSGA IVPFFAVDLP TAAIADMIVL VGFFALGRFF LALAGMDVGT
AFGGMGSSRE MTIASLAEPA MLMAIFTLAL TASTTNISVA IDYLLDTGLA LRPSFLFALG
GLLLVAVAET GRIPIDNPAT HLELTMIHEA MILEYSGRHL ALIEWAGQIR LMLYGVLIAN
IFLPWGLARE FTPEALGIGA AAIAAKLGAL AVALALAETS VAKMRLFRVQ EFLGFAYLLS
LLGMLSHIIL EV
|
|---|
| |