| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA1114 |
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| Symbol | xpsE |
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| ID | 3103952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | + |
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| Start bp | 1169534 |
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| End bp | 1171291 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637170299 |
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| Product | general secretion pathway protein E |
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| Protein accession | YP_113584 |
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| Protein GI | 53804537 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02533] general secretory pathway protein E |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCAGG CAGTATCGAG AAAGACCGAG GCGGAACCGC TCGTGCCCGC CGAGTTGTTG
CAGGATCCTG ACGGCTATGG CCGATTCGCC GATGCCCTGC TTCGGCGCGG CAAGGTCCGC
GAAATGGATC TGGCAAGGGC GAAGCGCCTC GCGGCACAGG CGGACGAGCT GCGCCTCCCC
GCCTTGCTGG TCAAGCTGGG CGTGGTCTCG GAGCGTGACG TGGCCGAGAC CCTGGCCGAA
GCCAGCGGTC TTCCCCTGAT CGGTCCCACC GATTATCCCG ACGTGTCGCC CTTGCCGGAA
GGCATCGCGT CCCGGTTTCT CAAGGATCGT CATGCCGTCG GCATCGCGGC CAGGGCCGAC
GGTTTCGTCG TGGCGGTGGA GGATCCGTTC GATGCCGAGC TGATCCATGC GCTCGGGCTG
GCCTGTGGTC AGCCGGTCCA TCCGGTGGTC GGTCTGGCCT CGGAGATCGA CCGGGCGCTG
GAGCAGCAGA TCGGCTCGGG CCGTTCGGTG ATGGGCCAAA TCGTCGAAAA CCTGGGCGGC
GACGAGGACG CCGACGAGGC CGACGTCGAA CACCTGAAGG ATCTCGCCAG CGAAGCGCCG
GTGATCCGCA TGGTGAACCT CATCATGCAG CGCGCGGTGG AATCGCGCGC CTCGGACATC
CATGTCGAGC CCTTCGAGCA GACGCTCAAG GTACGGTTCC GCATCGACGG CGTGTTGCGC
GATGTGGAAG CGCCGCCGGT ACGCTCCACC GCGGCGGTGA TTTCGCGCAT CAAGATCATG
GCCAAGCTCA ACATCGCCGA GCGGCGCCTG CCGCAGGACG GCCGGATCAA GCTGCAGGTG
CAGGGGAAGG AGCTGGATCT GCGCGTTTCC ACCGTGCCCA CGATGTACGG TGAGAGCGTC
GTGATCCGGC TTCTGCACAA AGAGAGCATC ACCTTCGATT TCGGCACGCT GGGATTCGAT
GGTTCGGTGT TGCGGCGTTT CCTCGAGATC CTCGAGCTAC CCCACGGTAT CATCCTGATC
ACGGGACCCA CCGGCAGCGG CAAAAGCACC ACGCTGTATA CCGCCCTGCA CAAGATCAAC
ACGCCTTCGC GCAAGATCAT CACGGTCGAG GACCCGGTGG AATACCAGCT GGAAGGCGTC
AACCAGATCC AGGTCAAGCC CCAGATCGGT CTGAATTTCG CGAGCGCGCT GCGCTCCATC
ATGCGTCAGG ACCCGGATGT GATCATGATC GGTGAGATGC GCGATCTGGA GACGGCCCGT
ATCGCCGTGC AATCGGCGCT GACCGGCCAC CTGGTACTGT CCACGCTGCA CACCAATGAC
GCCGCCGGCG GCGTGACCCG TCTTTTGGAC ATGGGGCTCG AGGACTATCT CATCACCTCG
ACCGTGAATG GTATTCTCGG CCAGCGTCTG GTGCGGCGGC TGTGTCAGAG TTGCCGCGAA
CCACATCCGG CGCTGGAGGA GGTCGCGGAA GAAATGGGGC TGCGGCGGTT CCAGCGTGAC
GGCGAGGTGG TGCTGTACCG GCCGGTCGGC TGCGAACAAT GCGGCGGCAC CGGTTTTCGT
GGACGGCTCG CGATCCTCGA GTTCCTGGTC ATGTCCGACG AGGTGCGGCG GTTGGTGATG
AGTCACGCCC AGGCGCGGCA GATCGAGGAG GTCGCCCTAC GCGAAGGCAT GCATACCATG
TATGACGATG GTGTCCGCAA GGCTTTGATG GGGCTGACCA CCGTCGAAGA GGTCCTGCGC
GTCACCTCGG ATTCCTGA
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| Protein sequence | MTQAVSRKTE AEPLVPAELL QDPDGYGRFA DALLRRGKVR EMDLARAKRL AAQADELRLP
ALLVKLGVVS ERDVAETLAE ASGLPLIGPT DYPDVSPLPE GIASRFLKDR HAVGIAARAD
GFVVAVEDPF DAELIHALGL ACGQPVHPVV GLASEIDRAL EQQIGSGRSV MGQIVENLGG
DEDADEADVE HLKDLASEAP VIRMVNLIMQ RAVESRASDI HVEPFEQTLK VRFRIDGVLR
DVEAPPVRST AAVISRIKIM AKLNIAERRL PQDGRIKLQV QGKELDLRVS TVPTMYGESV
VIRLLHKESI TFDFGTLGFD GSVLRRFLEI LELPHGIILI TGPTGSGKST TLYTALHKIN
TPSRKIITVE DPVEYQLEGV NQIQVKPQIG LNFASALRSI MRQDPDVIMI GEMRDLETAR
IAVQSALTGH LVLSTLHTND AAGGVTRLLD MGLEDYLITS TVNGILGQRL VRRLCQSCRE
PHPALEEVAE EMGLRRFQRD GEVVLYRPVG CEQCGGTGFR GRLAILEFLV MSDEVRRLVM
SHAQARQIEE VALREGMHTM YDDGVRKALM GLTTVEEVLR VTSDS
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