Gene MCA1105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCA1105 
SymbolcydA 
ID3104501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylococcus capsulatus str. Bath 
KingdomBacteria 
Replicon accessionNC_002977 
Strand
Start bp1160863 
End bp1162440 
Gene Length1578 bp 
Protein Length525 aa 
Translation table11 
GC content61% 
IMG OID637170290 
Productcytochrome d ubiquinol oxidase, subunit I 
Protein accessionYP_113575 
Protein GI53804554 
COG category[C] Energy production and conversion 
COG ID[COG1271] Cytochrome bd-type quinol oxidase, subunit 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGGTG AAGACATCGT CAACCTTTCC AGGCTGCAAT TCGGCCTGAC CGCGCTCTAC 
CATTTTCTGT TCGTGCCGTT GACCTTGGGG CTGGCTTTCC TGCTGGCCAT CATGGAATCG
GTCTACGTGA TGACCGGCAA GGAGGTGTAC AAGGACATGA CCCGCTTCTG GGGGAAGCTG
TTCGGCATCA ACTTCGCCAT GGGAGTGACG ACCGGCATCA CCCTGGAATT CCAGTTCGGC
ACCAACTGGT CCTATTACTC GCACTACGTC GGCGATATCT TCGGCCCCAT CCTGGCCAGC
GAAGGCTTGG TGTCGTTCTT CCTCGAATCG ACTTTCGTCG GGCTGTTCTT TTTCGGCTGG
GACCGCATGA GCCGGGTGCA GCATCTATCG GTCACCTGGC TGCTGGCGCT GGGCACCAAC
ACTTCCGCGT TGTGGATTCT GATCGCCAAT GCCTGGATGC AGCATCCGGT GGGCACGGAA
TTCAACTACG AAACCCTGCG CATGGAGCTG ACCAGTTTCG CCGAGGTGTT CTTCAATCCC
GTGGCCCAGG TCAAATTCGT GCATACGGTC GCGGCTGGCT ATGTCACCGG AGCGATGTTC
GTCCTCGGCA TATCTTCCTG GTATCTGCTG AAGGGGCGGG ACGTCGGTTT CGCCCGCCGT
TCCTTCTCGA TCGCGGCGGC GTTCGGACTG GCTTCGGTTC TCTCCGTCAT CGTGCTGGGC
GATGAGAGCG GCTACACCGA CGGCGAGGTG CAGAAGGTGA AGCTGGCGGC GATCGAGGGT
GCTTGGGATA CCGAGAAGCC GCCGGCAGCG TTCACGGTGG TCGGATTCCC GGATCAGGAC
AGGGAAGAAA CCCGCTATGC ATTCAGAATA CCGTACGTGC TCGGCCTGAT CGCCACGCGT
TCCATCGACG AAGAGGTCAA GGGACTCAAG GAACTGCGGG CGTCCAGCCT GGCCCACATC
CGCAGTGGCC AGATCGCCTA TGGGGCGCTG GAGAGGATGA GGGGAGGGGA CGCCAGCCCG
GCGGTGAAGG CGGATTTCGA GCAGCACAAG GCCGATCTGG GTTTCGCCCT GTTGCTTGCC
AAGTATACGG ACCGCATCGC CGGGGCGGGG GAAGACCTGG TGCAGAAGGC GGCCGCCGAT
ACCATTCCGA GCGTAGCGCC CTTGTTCTGG ACTTTCCGCG TGATGGTGGC CTGCGGCTTC
ACCCTGCTGT TCATCTTCGT GATGGCCTTC TATTACTGCG CGGTGCGGGT GGCGGACCGC
AAACGCTGGC TGCTGAAGCT GGCGGTCTGG TCCATCCCGT TGCCTTGGAT TGCGGCGGAA
ACCGGGTGGT TCGTGGCCGA GTACGGCCGC CAGCCATGGA CCATTTCCGG TGTGCTTCCC
ACGCACCTGA GTACCTCCTC ACTCAGCGCT GGGGATCTGT GGTTCAGCAT CGCGGGTTTC
GCTTTCTTCT ACACGGCGCT CCTGGCGATC GAGCTTTACC TGATGGTCAA GTACGTCAAG
CTCGGCCCCA GCAGCCTGCA CACGGGGCGA TATCATTTCG AGCGGCCGGC GGCGGCGCTC
TCCGGTTCAG CAGTCTGA
 
Protein sequence
MIGEDIVNLS RLQFGLTALY HFLFVPLTLG LAFLLAIMES VYVMTGKEVY KDMTRFWGKL 
FGINFAMGVT TGITLEFQFG TNWSYYSHYV GDIFGPILAS EGLVSFFLES TFVGLFFFGW
DRMSRVQHLS VTWLLALGTN TSALWILIAN AWMQHPVGTE FNYETLRMEL TSFAEVFFNP
VAQVKFVHTV AAGYVTGAMF VLGISSWYLL KGRDVGFARR SFSIAAAFGL ASVLSVIVLG
DESGYTDGEV QKVKLAAIEG AWDTEKPPAA FTVVGFPDQD REETRYAFRI PYVLGLIATR
SIDEEVKGLK ELRASSLAHI RSGQIAYGAL ERMRGGDASP AVKADFEQHK ADLGFALLLA
KYTDRIAGAG EDLVQKAAAD TIPSVAPLFW TFRVMVACGF TLLFIFVMAF YYCAVRVADR
KRWLLKLAVW SIPLPWIAAE TGWFVAEYGR QPWTISGVLP THLSTSSLSA GDLWFSIAGF
AFFYTALLAI ELYLMVKYVK LGPSSLHTGR YHFERPAAAL SGSAV