| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA1102 |
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| Symbol | |
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| ID | 3103939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | - |
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| Start bp | 1157365 |
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| End bp | 1158564 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637170287 |
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| Product | sigma-54 dependent transcriptional regulator |
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| Protein accession | YP_113572 |
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| Protein GI | 53804564 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCTACT GGAGTTCGGC TGCCGAGCAG CTGACGGGCC ACACGGGTGA ATTTGCGACC
GGCGAATCCA TCGCCCGGCT GCTGCCCGGC TATGGCCCCC CTCGAGCTGA CGACGGCAGA
GGCGAGGACG AAATCCGGGT CGAGCGGGCG GATGGCTCGG CGCTGCTGTT GCGACGCCGG
TACCATCCCC TCCGGGACCG GGAAGGGGCC GCCCGGGGCC GCCTGGAAGT ACTCACCGCG
ATCGAAACCA TCGGTACCCC TCTGGCGGAA GCCGATGTCG AGATCTTGCA TGGACTGCTC
ACGCGCGAAC CGGCGATGAA ACAGGTGTTC CGTCTCATCC GCAATGTCGC GGAAACCGAG
GCCACGGTAT TGGTCCGCGG CGAATCGGGC ACCGGCAAAG AACTGGTCGC CCGCGCCGTG
CATGCCGAGA GTCACCGCGC CAGGGAGCCG TTTCTCGCGG TCAATTGTGC CGCGCTGGCA
CCCTCGCTCC TGGAAAGCGA ACTGTTCGGG CATGTCCGCG GCGCGTTTAC CGGCGCCGTG
CGCAGCCATG CCGGGCTGTT CCAGCGCGCC GACGGCGGCA CCTTGTTCCT CGATGAAGTC
GCCGAACTGC CGCTTGAGCT GCAGGCCAAG CTGCTGCGCG TGCTTCAGGA ACGAAGCTTC
GTTCCGGTCG GTGGCGACCG CATGCTCAGC GTGGATGTAA GGATCGTGGC AGCGACCCAT
CGCTCGCTGC GGGATGCGGT ACGCGAGGGC CGCTTCCGCG AGGATCTGAT GTACCGTCTG
CGGGTAGTCC CCCTCTTCCT GCCACCCTTG CGCGAGCGCC GCCGCGACAT CGGCCTGCTG
CTCTGGCATT TCATCGAACG GCACAATGCC CGCGGCCTGC GCCGCATCGT CCGCATCGAC
CCCGATGCCA TGCGCCGGCT GCTCGACCAT GCCTGGCCGG GTAATGTGCG CGAATTGCAG
AACGTGGTGG AATACGCCTT CGCCGTGGGG CGGGGGGAGG TGCTGGAACT CGATGATCTG
CCGCCCGAAT TCCGCGACGA GCGCGCCGGG CCGCAAACGT CCATGGAAGC CGTGCCGGAT
GAGGCCGATC GCATCCGCAC GGCGCTGCGG CAATCCGGCG GGCGCATCGA CCAGGCCGCC
CGGCTGCTGC AGATGAGCCG GGCGACGCTA TGGCGCAAAA GGAAGAAGCT GGGCGTGTGA
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| Protein sequence | MSYWSSAAEQ LTGHTGEFAT GESIARLLPG YGPPRADDGR GEDEIRVERA DGSALLLRRR
YHPLRDREGA ARGRLEVLTA IETIGTPLAE ADVEILHGLL TREPAMKQVF RLIRNVAETE
ATVLVRGESG TGKELVARAV HAESHRAREP FLAVNCAALA PSLLESELFG HVRGAFTGAV
RSHAGLFQRA DGGTLFLDEV AELPLELQAK LLRVLQERSF VPVGGDRMLS VDVRIVAATH
RSLRDAVREG RFREDLMYRL RVVPLFLPPL RERRRDIGLL LWHFIERHNA RGLRRIVRID
PDAMRRLLDH AWPGNVRELQ NVVEYAFAVG RGEVLELDDL PPEFRDERAG PQTSMEAVPD
EADRIRTALR QSGGRIDQAA RLLQMSRATL WRKRKKLGV
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