Gene MCA1064 details

Gene Information

• Locus tag: MCA1064
• Symbol: rplJ
• ID: 3102656
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: +
• Start bp: 1113506
• End bp: 1114033
• Gene Length: 528 bp
• Protein Length: 175 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 637170253
• Product: 50S ribosomal protein L10
• Protein accession: YP_113539
• Protein GI: 53804626
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0244] Ribosomal protein L10

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0220515
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGCACTGA GACTCGATGA CAAGAAAGCG GTCGTCGCCG AGGTTGCAGC CGTTGCCGCC 
CGAGCGCACT CCGCAGTTGC GGCGGAATAC CGGGGGCTGA GCGTCTCGGC ACTGACGCAG 
CTCCGCAAGG AGGCGCGTGA GTCCGGGGTA TACCTGCGCG TGGTCAAGAA CACCTTGGCG 
CGCAAAGCCG TCGAAGGCAC CGGTTTCGAG TGCATGCAGG ACGGTTTGGT AGGGCCCTTG 
ATCCTTGCGT TCTCCCTTGA GGATCCGGGC TCCGCGGCCC GCGTGGTCAG TGCGTTCGCC 
AAGACCAACG ACAAGCTCGT CGTGAAGTTG GTGGCGGTCG GCGGCAAACA ATATGGTCCT 
TCCGAGCTCG AGCGTTTGGC TTCGCTGCCG AACCGCGAGC AGGCGATCAG CATGCTGATG 
GGCACGATGA AGGCGCCAAT CGAAAAGTTC GTCCGCACCC TGGCGGAGCC GCACGCGAAG 
TTCGTGCGCA CCTTGGCGGC GGTTCGAGAT CAGAAGCAGG CCGCGTAA 

 

Protein sequence

MALRLDDKKA VVAEVAAVAA RAHSAVAAEY RGLSVSALTQ LRKEARESGV YLRVVKNTLA 
RKAVEGTGFE CMQDGLVGPL ILAFSLEDPG SAARVVSAFA KTNDKLVVKL VAVGGKQYGP 
SELERLASLP NREQAISMLM GTMKAPIEKF VRTLAEPHAK FVRTLAAVRD QKQAA