| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA1055 |
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| Symbol | ispE |
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| ID | 3104018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | + |
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| Start bp | 1106161 |
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| End bp | 1107036 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637170239 |
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| Product | 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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| Protein accession | YP_113530 |
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| Protein GI | 53804650 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
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| TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGACCGTC GGGAATCCTC CGTCATGAAG TCGCCTTCTC TGCGTTTGCC GGCACCGGCC
AAGCTCAATC TAACCCTTCG TATCACGGGT CGCCGTCCCG ACGGATACCA TGATCTGCAG
ACGGTGTTCC AATTCGTGGA CGTGTGCGAC TGGCTCGAAT TCCGCGCCGA TGCCTCCGGC
GAAATCCGCT TGCAGACTTC ACTGGCGGGC GTGCCGGCGG AACGGAATCT GATCGTCCGT
GCCGCCCGCC TGCTCAAGGA ATATGCAGGC GTGGCCGCCG GGGCCGACAT CGTCTTGGAG
AAAAACCTAC CGATGGGGGG CGGTCTGGGC GGCGGAAGCT CGAATGCGGC GACCACGCTG
GTGGCGCTGA ACCGCTTGTG GGATCTGGGT CTGGACCGGC AAACGCTGAT GAATCTCGGT
CTCCGCCTCG GAGCGGACGT GCCGATCTTC GTGTTCGGCG AGGGCGCCTG GGCGGAAGGT
GTGGGCGAAA GGTTGCAAGT CCTGGAACTG CCCGAGCCGT GGTACGTCAT CGTTGTGCCG
CCATGCCATG TTTCGACGGC CGAGATATTC AACGCCCCTG ATTTGACAAG AGATAACGAC
CCGATCACAA TAGCGGACTT CCTTGCGGGA TCCCATCAGA ATCATTGCCT GGACGCCGTC
GTGCGTCGAT ATCCCGTGGT GGGCGAGGCG ATGTGCGTGT TGGGGCGATA CTCCCGGGAT
GTCCGGCTAA CGGGTACGGG TGCCTGCGTA TATTCGGTCC ACGGTAGCGA GGAAGAAGCC
AAGGCCGCAT GCGACGATCT GTCCCGCGAT TGGGTCGCGA TAGTGGCGTC CGGCCGCAAC
CTGTCGCCTC TGTACGAGGC GCTGAACGAA CGATAG
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| Protein sequence | MDRRESSVMK SPSLRLPAPA KLNLTLRITG RRPDGYHDLQ TVFQFVDVCD WLEFRADASG
EIRLQTSLAG VPAERNLIVR AARLLKEYAG VAAGADIVLE KNLPMGGGLG GGSSNAATTL
VALNRLWDLG LDRQTLMNLG LRLGADVPIF VFGEGAWAEG VGERLQVLEL PEPWYVIVVP
PCHVSTAEIF NAPDLTRDND PITIADFLAG SHQNHCLDAV VRRYPVVGEA MCVLGRYSRD
VRLTGTGACV YSVHGSEEEA KAACDDLSRD WVAIVASGRN LSPLYEALNE R
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