Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA1027 |
Symbol | |
ID | 3103211 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | - |
Start bp | 1078669 |
End bp | 1080003 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637170212 |
Product | hypothetical protein |
Protein accession | YP_113503 |
Protein GI | 53804829 |
COG category | [S] Function unknown |
COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.203435 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATGACCA ACCGACGGCA CCGGCGAAAG CGCTGGCTCA GGATTCATTC GACCCTCGCC TTGAGCGTCG GGTTTCTCTT CGTCCTCACG GGACTCACCG GCAGTCTGAA TCTGGTCGGC CCGGAACTCG ACCGTTGGCT CAATCCCGAG CTCACGGTGA TCCCCCGCGC TGGCGGCGGG TTGTCACCGG ACCAGATGAT GGCTGCGGTG AAATCCGCCC ATCCCCGACG CTTCGGATCG TGGCGGCTGC AATTCCCGGA GTCGCCCGAC AGCCCGGCGG TCGCATGGTA CGACAAACCG ATCGAAACCA GCGGAGAACC CTATGCCCCA CTCATGGTGG CCATCGATCC CTACACGGGG AAAATCCTGG CAAACCGGTT CTGGGGCCAC ACCTTCGCAA CCTGGACCCA CCGCCTGCAT TCGCAGTGGC TTTTGGGCGG ATTCGGCCAG GCGCTCGTCG GCCTGACCGG CCTGGCGCTG CTGGCCAGCC TCGTCACCGG TTTCCGGCTG TGGCTGCCAG CCGGCCGCCG TCTGCGCCAA GCAATGACCA TCAAGTCCCG GGCCGGCTTC AAGCGGAGAA TTTTCGACCT GCACCGGATC GCCGGGATTT ACGGCCTGCC GCTACTGGTG ACCGCCGCCC TCACCGGGCT GCATCTCGCG TTTCCCTCGC TGCTGACCAC CGTGACCGGC ACCGCGGATT TCGGGCATCA TGACAGCCCC GATGCGGAAG AAATCACCGC CTCGTCCGCC GTTTCCGACA CGCCGCTGAA CCTGACCCAG GCCATACTGA TGGCCCGCGG CCTGTTTCCG AACGCTGTCG TCGACAGCGT GACCACCCCC CGTGCCAGCA ACGGCATGTA CCGGGTGGAC TTCCGCCGGA CCGGAGAGCA TCACGCCCTC ACCACCGTCT GGGTGGACCC CTACAGCGGC CACATCCGCC AGACCCGCAA CTCCGCCGAC TTCAGCCGGG GACAACGCTT CGTCAACGCC ATCCGCCCCT TGCACAACGG CAGCCTGTTC GGCGCAACCG GCCGCATCCT GGGATTTCTT GGCGGTTTCG TCCCCCTCGC ACTGTATGTG ACCGGCCTCG TCCACTGGGC GCACAAGCGG CGGATCGACG TGGTCCGTTA TCGTCCCCGC CTTCCTTCCC GATGGATCCG GCTTTGGCAC CGCCATTGGC CGGAGCTGAA GGACCTGCTG TCGGCTCTCG CCCATGCTGC AACGGTGCAT ATCGCTCATG TCACGGCGGC TCTGTCCCGC GGCATGGCGA AAATCCGGGC GGAACGGCAG CGCGGTCGCT CGCGGGACCG AACTCCTCTT GGACCGTCAC AATGA
|
Protein sequence | MMTNRRHRRK RWLRIHSTLA LSVGFLFVLT GLTGSLNLVG PELDRWLNPE LTVIPRAGGG LSPDQMMAAV KSAHPRRFGS WRLQFPESPD SPAVAWYDKP IETSGEPYAP LMVAIDPYTG KILANRFWGH TFATWTHRLH SQWLLGGFGQ ALVGLTGLAL LASLVTGFRL WLPAGRRLRQ AMTIKSRAGF KRRIFDLHRI AGIYGLPLLV TAALTGLHLA FPSLLTTVTG TADFGHHDSP DAEEITASSA VSDTPLNLTQ AILMARGLFP NAVVDSVTTP RASNGMYRVD FRRTGEHHAL TTVWVDPYSG HIRQTRNSAD FSRGQRFVNA IRPLHNGSLF GATGRILGFL GGFVPLALYV TGLVHWAHKR RIDVVRYRPR LPSRWIRLWH RHWPELKDLL SALAHAATVH IAHVTAALSR GMAKIRAERQ RGRSRDRTPL GPSQ
|
| |