Gene MCA1012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCA1012 
Symbol 
ID3102229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylococcus capsulatus str. Bath 
KingdomBacteria 
Replicon accessionNC_002977 
Strand
Start bp1061889 
End bp1062902 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content63% 
IMG OID637170197 
Producthypothetical protein 
Protein accessionYP_113488 
Protein GI53804861 
COG category[I] Lipid transport and metabolism 
COG ID[COG3000] Sterol desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCTGA GCAATCTGAC GTCGCATCTG AAGTTCCCCG GCATCGACCG TCTGGGGCAG 
GATTTGGCCG TCGAGGACAT GCTGCCGGCG GTGATTCTGC TGACGTTCGC CGTTCTGATG
GCGGCCGAGG TCCGGCTCGG CCGGGGCGGG CGCGCCAATC CCTCGGTGCG GAAATCGTAC
CGGACGAACC TGTCGTTGTT CCTGTTCAAT GACCTGCTGA TGTCCGCATT GTCGGTGTCT
TCCCTCCTGA TATTGGCGGA GCGCCACACC GGCGGCGGAC TCCTGGCGGG CGTGAGCAAC
CCCTGGCTCC GGGGGCTGCT GGCCCTGCTC TTGCTCGATC TGGTGCTGTA TTGCTGGCAC
TGGGCCAGCC ACCGCCTGTC CTGGCTGTGG CTGTTTCACA AGGTGCATCA CAGCGACCGC
TCGATGAACG TGACGACCGG TTTCCGGCTG CATTTCGTCG AGGTGCTGTT GACGGTACTG
GTCAAGGCCG GCTTCATCGT GATCACGGGT GTGCATGCCG CCCAGGTCCT GCTCAGCGAG
GCGCTGATCA CCCTGGCCGT GCTGTTCCAC CATGCCGATG TCTCGTTCCC GGGGGAGCGC
CGACTAGGCC GTCTGTTCGT CGTGCCGAGC CTGCACCGGG TGCATCACTC GGCTTTACGC
AGCGAGCACG ATCGCAATTA CGGCGCGCTG TTTTCCTTTT GGGACCGGCT TTTCGGCACG
CTGCTGGAAG TCCGGCCGGC ACAGATCGGC TTACGCGAGG TGGACGCCTT GGGCTTCGTC
GAAACCCTGA AGTTCGGTTT CACCTACGCC TACGGGTCGA CACCCCTTCC TCTCCGGCTT
CACTCGGGTC AGTCGTTGGA GCCGATGATC GCCGAAGCTG CCTATTTCCG GGCCGAAAAG
CGCGGGTTCA TGCCGGGGTT CGAGATGTTC GACTGGCTGG CGGCCGAGCG CGAAATCGAA
GAGCGGATGA ACGTTGGTCG CATCAATGCC GGAACTGCCC GGCGGACGCC GTGA
 
Protein sequence
MILSNLTSHL KFPGIDRLGQ DLAVEDMLPA VILLTFAVLM AAEVRLGRGG RANPSVRKSY 
RTNLSLFLFN DLLMSALSVS SLLILAERHT GGGLLAGVSN PWLRGLLALL LLDLVLYCWH
WASHRLSWLW LFHKVHHSDR SMNVTTGFRL HFVEVLLTVL VKAGFIVITG VHAAQVLLSE
ALITLAVLFH HADVSFPGER RLGRLFVVPS LHRVHHSALR SEHDRNYGAL FSFWDRLFGT
LLEVRPAQIG LREVDALGFV ETLKFGFTYA YGSTPLPLRL HSGQSLEPMI AEAAYFRAEK
RGFMPGFEMF DWLAAEREIE ERMNVGRINA GTARRTP