| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA0996 |
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| Symbol | |
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| ID | 3104492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | + |
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| Start bp | 1041536 |
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| End bp | 1043185 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637170182 |
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| Product | thiamine pyrophosphate enzyme family decarboxylase |
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| Protein accession | YP_113473 |
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| Protein GI | 53804891 |
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| COG category | [G] Carbohydrate transport and metabolism
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG3961] Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.604603 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCACGG TTGAGCCTGG CGCTATCGGA CAACATCTGC TCGCCTGCCT TTACCAGGCG
GGCGTCGGGC ACATCTTCGG CGTTCCCGGC GATTACGTGC TGGGCTTCTA TGATCTGATG
GCCAAAGGTC CCGTCCGGCA TATCGGGACC ACGCGGGAGG ACACCGCCGC CTTCGCCGCC
GACGGCTATG CCCGCTGCCG GGGCATGGGC GCGCTGGCGG TGACTTACGG GGTCGGTGCG
CTCAACACCG TCAACGCCGT CGCCGGCGCC TATGCGGAAT CCTCGCCGGT GGTGGTCATC
AGCGGTGCGC CGGGGGTGCG CGAGCAAAGG GAAGACCCGT TGATCCACCA CCGCTTCGGG
CCGTTCCGGT TCCAGCGCGA GATATTCGAA CGGATCACCT GCGCCGCCGT GGTGCTGGAC
GATCCGGTGA TCGCCTTCCG GCAGGTGGAG CGTGCGCTCG CGGCCGCCCG TCAGCACTGC
AAGCCGGTGT ACATCGAGAT TCCCGCCGAC CGGGTGATGG CGCCGGGATA TCCGATTCCA
CAGGAAACCC CGGAAACGCC TTCCAGCGAC GATTCGGCCC TGGCGGAGGC GGTCGCCGAG
GCCGCGGAGC TCCTGGGCCG TGCGGTGTCG CCGGTGATCC TTGCAGGCGT CGAGTTGCAC
CGGCGAGGGC TCCAGGACGC CCTCGTCGGC CTCGTCGAGC AGGCGCGCCT GCCGGTGGCG
GCGACCTTGA CCGGCAAGTC GGTGTTCGCC GAGCGCCATC CCGCCTATCT GGGGGTGTAC
GAGGGTGCGA TGAGCACGGA AAACGCGCGC TACATGGTCG AGCAGTCCGA CCTCCTGCTG
ATGCTCGGGG TCACGCTGAA CGATGTCGAC ACGGGCATCT ACACGGCGCG TCTCGATCCG
CAGCGCATCG TCCGCGCAGC CCAGAACGAG GTCGTGATTC GCCATCACCG CTATCCCCGC
GTCCTGCTCG CGGACTTCGT CACGGCCCTG GCGCGGTCCG TCAAGGCCCG GGGCGAGGCG
TTTCCGATGC CGGCGGGGCC GGAACCGTGG GACTTTCCCG CGCCGGACCG GCCGATGACG
ATCGCCCGGC TGGTGGAGCG GCTCGACCGC GCGCTGACCT CCGACATGAT CGTAGTGTGC
GACGTCGGCG ACTGCCTGTT CGCAGCCACC GACCTGCGCG TGCACGAGCG CAGCGAATTC
CTGGCGTCCG CCTTCTATAC CTCGATGGGG TTCGCGGTGC CCGCCGCCCT CGGGGCCCAG
ATCGCCCGTC CGGACCACCG GGCGCTGATC CTGGTCGGCG ACGGTGCCTT CCAGATGACC
GGAACGGAGC TGTCGACCCA TGCCCGTCTC GGCCTGGCGC CCATCGTGGT GGTGCTCGAC
AATCGCGGTT ACAGCACCGA GCGCTTCATC CTCGACGGAG CCTTCAACGA CATCGCCGAC
TGGCGCTTCC ACCGGCTGGG CGAGGTGTTC GGCCCCCTAC AGGGCTACGA CGCGCCCGAC
GAAGCGGCGT TCGAAAACGC GCTCAGCGAA GCGCTGGTCA ACCGAAACAT GCCGAGCCTC
ATCAACGTCC GTCTTTCCCC CGGCGATGCC TCGATAGCCA TGAAGCGTCT CGCCGGGCAT
CTGCAGTGCC GGGTCAAGGG CGAGGGCTGA
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| Protein sequence | MGTVEPGAIG QHLLACLYQA GVGHIFGVPG DYVLGFYDLM AKGPVRHIGT TREDTAAFAA
DGYARCRGMG ALAVTYGVGA LNTVNAVAGA YAESSPVVVI SGAPGVREQR EDPLIHHRFG
PFRFQREIFE RITCAAVVLD DPVIAFRQVE RALAAARQHC KPVYIEIPAD RVMAPGYPIP
QETPETPSSD DSALAEAVAE AAELLGRAVS PVILAGVELH RRGLQDALVG LVEQARLPVA
ATLTGKSVFA ERHPAYLGVY EGAMSTENAR YMVEQSDLLL MLGVTLNDVD TGIYTARLDP
QRIVRAAQNE VVIRHHRYPR VLLADFVTAL ARSVKARGEA FPMPAGPEPW DFPAPDRPMT
IARLVERLDR ALTSDMIVVC DVGDCLFAAT DLRVHERSEF LASAFYTSMG FAVPAALGAQ
IARPDHRALI LVGDGAFQMT GTELSTHARL GLAPIVVVLD NRGYSTERFI LDGAFNDIAD
WRFHRLGEVF GPLQGYDAPD EAAFENALSE ALVNRNMPSL INVRLSPGDA SIAMKRLAGH
LQCRVKGEG
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