Gene MCA0985 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCA0985 
Symbol 
ID3102462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylococcus capsulatus str. Bath 
KingdomBacteria 
Replicon accessionNC_002977 
Strand
Start bp1030441 
End bp1033371 
Gene Length2931 bp 
Protein Length976 aa 
Translation table11 
GC content64% 
IMG OID637170173 
Productsensory box protein 
Protein accessionYP_113464 
Protein GI53804907 
COG category[T] Signal transduction mechanisms 
COG ID[COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain 
TIGRFAM ID[TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.928504 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCCGGG CGATGATCGA ATGCCTCCAG GATGAGGTGG TGACGGTCCA CGACATCGAA 
GACTGCGCCC GCATCATCTA CGCGAACGAA GCGGCCTGTC GCCATTTCGG CGTGGGTCTC
GAAACCCTGT TGACCTGGTG CCCGCTGGAT TTCGATCCCA CATACGACGA AGAATCCCTG
CGTCTAGCCC TCGAACGGCA CCGTCAGACC GGGGGCACGA AGTTCGAGAC GCTGCACCGC
GTGGCGGCGG GGATGGAGAT TCCTGTCGAG GTGACGGCGA ACCTGTTCGA GCAGGACGGC
AGGTTACTGG CGGTGTGCAT CAGCCGCGAC ATTCGCCCCC GCCGTGAAGC CGAGGCGCGC
ATGAAGGAGC TCGAGAGGCT GCAGGCCGAG CGGGAAGGGC TGGACCGTCT CGCCCGCTTC
GCCCAGTGTG CGCCGGGATT CATGTATACC GTGGAGGCGC GCGCCGACGG ACGTCTCGTG
ATGACGTACG CCAGCTCCGG CGTGGAGGAC ATCCTGGGAC TGAGCGTGGA AGCGGTCTTG
GCAGACATCG GCCATGTTCA TTCGCGCATC GTTCCCGAAG ACCGTGACCG GGTCATGCGC
TGCAAAGAGG CCTCGGCTCG TGAGCTGCAG CCGTTCACGG AGGAATACCG TATCCTTCAC
CCCGTCAAGG GCGAGCGGTG GCTGGAGGCC CGCTCCGTGC CGGAGCGGCA GAAAGACGGC
ATCACCCTGT GGCACGGTTT CCTGATCGAC ATCACCGAGC GGAAGCGGAT GGAGGAAACC
TTGCAGTTCA TCGCACAGCG CAGCTGGGCC ACGGAAGGCG AGGCATTCTT TTCCGCCATT
GCGCATCACC TCGGCAGGAT TCTCGGGGTC GATTACGTCG TCATCGACCG GCTAGCCAGG
GACGCCGAAC TCGCCGAGAC CGTCGCGCTG TATGCCCGCG GCGAAGACTT GCCCAACATC
TGCTACAGAC TCGCCGGAAC GCCCTGCGAA AACGTCATGG GCCGCAGCCT ATGCTGTTTC
CCCCGCCAAG TACGCCGGCT GTTTCCTGAC GACCTCATGC TGCAGGACAT GGGGGTGGAA
AGCTACGTCG GCGTGCCGCT GTGGGATTCG GCCGGAACCG CGATCGGCCT GATCGCGGTG
ATGCACGGCG AGCCGATGGC GGAGCCGGAG TCCGTGACCG CCCTCCTGCA GCTCGTGGCG
ACCCGGGTCG CGGCGGCTCT GGAACGCGAC CGCTCGGAGC GGCAGCTCAA GGCGCGTGAA
CAGGAGTTCC GTTCCCTGGT CGAGCACTCG CCCGACACCG TCGCCCGCTA TGACCGGGAC
TGCCGCCGTA TCTACGCCAA TCCCCGGCTG GTGGAAGAAG CCGGCGTGCC TCTCTCGGAA
CTCTTGGGGA AAACGCCGGT CGAGTTTCCG GGCGGCGAAA GTTCCCGTGC CTACCAGGCG
AAGATTCGGC AGGTTTTCGA AACGGGGGAG CCGGCGGAGT TCGAGCTGAG CTGGAAAACG
GCGCAGGAAC GGGAGCTGAT CTCCCATATC CGGCTGACGC CGGAATTCGG TTTCGACGGC
GAAGTCATGC ATGCGCTGGC GATCGGGCGG GACATCACCG AAATCGACGC CTATCGGCGG
CGTATCCATC ACCTCGCATT TTTCGATTCC TTGACCGGAC TGCCGAATCG GGAAATGCTC
AACAAGCGTA TCCGGGAGGT CATGGATGGC AATCCCCGTC CGGGCCGGCA GTTCGCCCTG
ATGATGCTGG ACCTCGACCG CTTCAAGGAA ATCAACGACA CCCTGGGACA CGGGATCGGC
GATCTGCTGC TGGGAAGAGC CGCCCGCCGT TTGCTGGGGG CGGTCGGCAA GGACGATACG
GTGGCGCGGC TGGGCGGCGA TGAATTCGCC GTTCTGGTGC CGGCGCCGGC CGCTTCCCAA
GAACTCACGG CGCTGGCTGG CCGGATACTC GACGCCTTTG CCCGGCCTTT CCTGATCGAG
GGCCGCGAGC TGTTCGTTTC GGTCAGTCTC GGTATCGCGC TTTACCCCCG GGACTGCACC
GGCATCGATA CCTTGTTCCG TTATGCCGAC ACCGCCATGT ATCACGCCAA GCGGCAGGGG
AGGAACAACT TTCAGTTCTA TTCGGCCGAG CTCACGGCTC GGGCGGCGGA GCGCATGCGG
ATCGAATCCG CCCTGCGCCG GGCGCTGGGG CGCAACGAAC TGGAGCTGCA CTTCCAATCG
CAGATCGACA TGGTTTCCGG AACCATCGTC GGCGCCGAGG CCCTGCTGCG ATGGAACAGG
CCGGGACGCG GCATCATACT GCCGCGTAAA TTCATCCCGA TCGCGGAGGA AACCGGTCTG
ATCGTCGGCA TCGGCGACTG GATCCTGGCC CAGGCCTGCC AGGCCGTCGT TGCCTGGAAC
CGCCACCGCG AGCAGCCGCT GCGCGTAGCC GTCAACCTTT CCACTCGCCA GTTCATCCTG
AACGACTTGG CCGGTACGGT GCAGCGCATT CTGGACGAGA CCGGCTGCCG GCCGGAGTGG
CTGGAGCTGG AAATCACCGA AAGCCTGCTG CTGGAAGACA GCAGGGGAGT CCGCGCGACC
CTCGATGCCT TCGACCGCAT GGGGCTGTCG ATCGCCATCG ATGACTTCGG TACCGGCTAT
TCCGCCTTGA GCTATCTGCA TCGCTTTCCG GTGAAACGGA TCAAGATCGA TCGCTGTTTC
GTCCACGGCA TTCCGTCCGA CCGCTGCAAA TCGGAGCTGG TCAAAGCCAT AATCTCGATT
GCCCAGGCCC TGGGCCTGGA GGTGCTGGCG GAAGGCGTGG AAACCCCACG ACAGGCCGTC
TATCTCCAGG CGCATGGCTG CCGTCTGGGC CAGGGCTATC TGTTCGGTGA GCCGCAACCG
CTTGTCGGTT TCGAGGCATC GATCGGACAG GACCGGAGCG CCATTTCCTG A
 
Protein sequence
MFRAMIECLQ DEVVTVHDIE DCARIIYANE AACRHFGVGL ETLLTWCPLD FDPTYDEESL 
RLALERHRQT GGTKFETLHR VAAGMEIPVE VTANLFEQDG RLLAVCISRD IRPRREAEAR
MKELERLQAE REGLDRLARF AQCAPGFMYT VEARADGRLV MTYASSGVED ILGLSVEAVL
ADIGHVHSRI VPEDRDRVMR CKEASARELQ PFTEEYRILH PVKGERWLEA RSVPERQKDG
ITLWHGFLID ITERKRMEET LQFIAQRSWA TEGEAFFSAI AHHLGRILGV DYVVIDRLAR
DAELAETVAL YARGEDLPNI CYRLAGTPCE NVMGRSLCCF PRQVRRLFPD DLMLQDMGVE
SYVGVPLWDS AGTAIGLIAV MHGEPMAEPE SVTALLQLVA TRVAAALERD RSERQLKARE
QEFRSLVEHS PDTVARYDRD CRRIYANPRL VEEAGVPLSE LLGKTPVEFP GGESSRAYQA
KIRQVFETGE PAEFELSWKT AQERELISHI RLTPEFGFDG EVMHALAIGR DITEIDAYRR
RIHHLAFFDS LTGLPNREML NKRIREVMDG NPRPGRQFAL MMLDLDRFKE INDTLGHGIG
DLLLGRAARR LLGAVGKDDT VARLGGDEFA VLVPAPAASQ ELTALAGRIL DAFARPFLIE
GRELFVSVSL GIALYPRDCT GIDTLFRYAD TAMYHAKRQG RNNFQFYSAE LTARAAERMR
IESALRRALG RNELELHFQS QIDMVSGTIV GAEALLRWNR PGRGIILPRK FIPIAEETGL
IVGIGDWILA QACQAVVAWN RHREQPLRVA VNLSTRQFIL NDLAGTVQRI LDETGCRPEW
LELEITESLL LEDSRGVRAT LDAFDRMGLS IAIDDFGTGY SALSYLHRFP VKRIKIDRCF
VHGIPSDRCK SELVKAIISI AQALGLEVLA EGVETPRQAV YLQAHGCRLG QGYLFGEPQP
LVGFEASIGQ DRSAIS