| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA0936 |
|---|
| Symbol | |
|---|
| ID | 3104281 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylococcus capsulatus str. Bath |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002977 |
|---|
| Strand | - |
|---|
| Start bp | 978285 |
|---|
| End bp | 980930 |
|---|
| Gene Length | 2646 bp |
|---|
| Protein Length | 881 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637170128 |
|---|
| Product | CRISPR-associated helicase Cas3 |
|---|
| Protein accession | YP_113419 |
|---|
| Protein GI | 53804731 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1203] Predicted helicases |
|---|
| TIGRFAM ID | [TIGR01587] CRISPR-associated helicase Cas3 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAGCC ATGAACATGT CGGATTTTGG GGAAAAATCC GTCTTGGTCA AAACGGGCAA
ACGGATCAAT GGCTATCGCT CTCCCAACAT TCACTGGATG TTGCTTCCGT ATTCGCGGCG
CTGGCCGAGC TCCCCGCATT CCATCACAAA CTGAAAGTCA GCTCAGGTAT TGAGCTGGAC
GGGATTCAGC TTCAAAGGCT TGCGGTCATC GCCTTGCTGC ATGACGTCGG CAAGGCGAAC
CTGGGTTTCC AGGACAAGGT CTTCGACGCC AAGGCACCGC GCGCGGGGCA TGTGCGGGAA
CTGGCGCCCC TGTTCGACGC CCCCGAGTTG TGCGAAGCCT TCGCTACAGC GCTCGACCTG
GACGAGATCG CAGACTGGTT CGACCCGCCA GATAGCATCG AGCAATTCCT GCTGGCCGCT
TGGTCCCACC ACGGCGCACC GGTGAGATTC CAAACCGGCG ATCAAACGGG CAATTACTAT
CTGGCCAGGA CCCGCTGGTG GCGAGCGGAC GCTACCAGAG ATCCGATGCA GGCCGTTGCG
GAACTGATGC GGATAGCGAA ACAGGCTTTT CCGGATGCCT TCAAGCGCGG AGTGGCCCGC
ATTCCCGGCC GGGCTCGACT GCAGCACAGA TTCGCCGGAC TGGTCATGCT GGCGGACTGG
CTCGGCTCCC ATCAAGCCTT TTTCCCTCTG GGGCGCCTGC TCGATATCGG CTTTGCCCGT
AATGCTGCTC GCCGCGCCTT GCTGACAGTC GGCCTGGATA CAGCCAGCCT CCAATCCGAC
CTCGCGCAGC GCCCAACCAC CTTCAAGCAC TGGTTTGGCT TTGAGCCTCG CCCCCTGCAG
TCGGCCGTTG ATCAACAAGC TCCCGACGAT GCCGAATCGC GGTTGCTGAT TGCCGAAGCC
GAAACCGGCT CCGGCAAGAC CGAGGCAGCC CTAGCGCGCT TTTTCCGTCT GTTCGCGGCC
GGTAAGGTCG ATGGCTTGTA TTTCGCGCTT CCCACCCGGG TGGCAGCAAG AGAGCTTTAC
CTCCGCGTCG TGAATTATCT GGAACAGATA TTTCCAAAGC CGGAATGCCG TCCGGCCGCG
GTGTTGGCCG TGCCACGTTA CGCTCGGATT GACAACGTCC CCATCGACAA ATTGGATCGA
TTGCTTCCGG ACGACAGGAT TCTTTGCCAT GACGATCCCG ACCGGCTCCG GCAGGAACGG
CAATGGGCGG CCGAGCACCC CAAACGTTTC CTGGCCGCTA CGGTGGCGGT GGGAACGGTT
GACCAAGCCT TGCTTTCGGC GGTGCAAACC AGACATGCTC ATCTGCGTTC CGTGTGTCTG
GACAGGAGTC TACTGGTGGT CGACGAAGTC CACGCCTCTG ATGTCTACAT GCGGCGATTA
TTGAGGGGAT TGTTATCCCA TCACGTTGGA CTCGGCGGCC ATGCGATGCT GCTTTCCGCA
ACGCTGGGCG CTTGGGCTTG CGCCGAATTC CTGCAGGCCT GTGGCTGCAC GACTCTTGCG
GCAGAAAATT ACGCCGGGGC CTGCGCCGCC CCGTATCCGG CTCTCACCCT CTTATCGGGT
ATTCGACGCT CCGTGGGGTT TGCGCGGGGC GGGTCGGTCA AGCGGGTCCG CATCGATCCG
CGCTCCTGGC TGAAGCAGCC GGAAAGGCTG ATATCCGAAC TGGTAAGTGC CTTGGAAGCC
GGCGCGCGGG TATTGATCGT GCTTAACACG GTCGGCCGGG CCAACGCCCT GCAACGGGCA
TTGGAGCAAC ATCCAGCCAT CCAGAAGGTT TGGTTGTTCC GTTGCCAAGA CTCGATCTGC
CCTCATCATG GCCGCTTCGC GCCCAGCGAT CGCGAGCTGC TGGATCAGGC GGTCAGCCGC
CGCTGGGGAA AGGGCACGCC ACCCGGTCCC CTGGTACTGA TCGGCACGCA AACCCTGGAG
CAAAGTCTCG ACATCGATGC CGACTGGCTC ATCACCGACC TGTGCCCGGC TGACGTGCTC
CTGCAACGTG TCGGGCGATT GCACCGGCAC GCCTGTACCC GTCCGCCCGG TTTCGAAGCG
CCGCGTTGCA CGGTGTTGAT GCCGGACTGC GCCAGCCTGG CAGAATGGCT CGACGCCAGG
GGCGAGGCAT CGAGGGAGGC GAAGAGAGCC GGATTCGGCA GCGTTTACGC CGACCTGCGG
ACTCTCGAAC TCACGCGGCT CATGTTGCTG GAACAAACCG AAGTTGAGAT CCCGCGCGAC
AACCGCCGCC TGGTGGAAGG CGCGACCCAT CCGGAACGAC TGGCCACGCT ATCTGGCCCC
GCTTGGGGAA AGCACGGCCA GAACGTGGAA GGTCTGACGC TCGCCCACAA CATCGCCGCG
TTCCACGTCG CCGCTCAATA CGACCGGCCC TTTGGCGAAC TCAGTTTCAA TGAACTGAAC
GAGAAGGCGA GAACCCGCCT GGGGCTGGAT ACCTTGCGCA TCCCGTTACG CCAACCCTCG
CCCGGCCCCT TCGGCGCGGA AATCGCCGAA ATCACCATAC CCGGGCATTT GGCGCCGAGG
GAAAGGGATG ACGAGACCGC CGAACTCATC CGTCGGGGCG CCGATGGCAT GATCCTGCGT
TACGGCGAGC GCCATTACCG CTATTCCCGC TTTGGCCTGG AGCCTTTCGA TGAATCTATT
GACTGA
|
|---|
| Protein sequence | MLSHEHVGFW GKIRLGQNGQ TDQWLSLSQH SLDVASVFAA LAELPAFHHK LKVSSGIELD
GIQLQRLAVI ALLHDVGKAN LGFQDKVFDA KAPRAGHVRE LAPLFDAPEL CEAFATALDL
DEIADWFDPP DSIEQFLLAA WSHHGAPVRF QTGDQTGNYY LARTRWWRAD ATRDPMQAVA
ELMRIAKQAF PDAFKRGVAR IPGRARLQHR FAGLVMLADW LGSHQAFFPL GRLLDIGFAR
NAARRALLTV GLDTASLQSD LAQRPTTFKH WFGFEPRPLQ SAVDQQAPDD AESRLLIAEA
ETGSGKTEAA LARFFRLFAA GKVDGLYFAL PTRVAARELY LRVVNYLEQI FPKPECRPAA
VLAVPRYARI DNVPIDKLDR LLPDDRILCH DDPDRLRQER QWAAEHPKRF LAATVAVGTV
DQALLSAVQT RHAHLRSVCL DRSLLVVDEV HASDVYMRRL LRGLLSHHVG LGGHAMLLSA
TLGAWACAEF LQACGCTTLA AENYAGACAA PYPALTLLSG IRRSVGFARG GSVKRVRIDP
RSWLKQPERL ISELVSALEA GARVLIVLNT VGRANALQRA LEQHPAIQKV WLFRCQDSIC
PHHGRFAPSD RELLDQAVSR RWGKGTPPGP LVLIGTQTLE QSLDIDADWL ITDLCPADVL
LQRVGRLHRH ACTRPPGFEA PRCTVLMPDC ASLAEWLDAR GEASREAKRA GFGSVYADLR
TLELTRLMLL EQTEVEIPRD NRRLVEGATH PERLATLSGP AWGKHGQNVE GLTLAHNIAA
FHVAAQYDRP FGELSFNELN EKARTRLGLD TLRIPLRQPS PGPFGAEIAE ITIPGHLAPR
ERDDETAELI RRGADGMILR YGERHYRYSR FGLEPFDESI D
|
|---|
| |