Gene MCA0931 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCA0931 
Symbol 
ID3104787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylococcus capsulatus str. Bath 
KingdomBacteria 
Replicon accessionNC_002977 
Strand
Start bp973455 
End bp974174 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content63% 
IMG OID637170123 
ProductCRISPR-associated Cse3 family protein 
Protein accessionYP_113414 
Protein GI53804736 
COG category 
COG ID 
TIGRFAM ID[TIGR01907] CRISPR system CASCADE complex protein CasE/Cse3 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.399372 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGCCT CGCTTTACAT GATTGAACTG CGACCGGACC CGGCAGCCCT GATCCGTTTC 
GCCCAAGATC AGGGGCTCAA TACCCACCAA GACCAAGACC TCGGATACGC AACCCACGCG
TGGCTCAAGG CCCTGTGCGG CGAACTGGCG CCGAAACCGT TTCGCCTGCT GCAGGATGGC
CGCAACCTCA GGCCGCCTCG GCTCCTGGGC TTTTCCGCCC ATGACGGCAC AAGACTGACA
GAGCACGCCC GCGCTTTCGC TTCACCACTG GCGGCGCAAG TCTGCTCCCT TGCCGATGGA
ATTGCTTTTA AGCCCATGCC GGAATCCTGG CCGAACGGGC GAAAGCTCGG TTTTGAGGTC
ATGGCCTGCC CCATCAGCCG GCTGGGACGC AACGAGGATG ACGTTTACCG CCGGCACTTG
CGGGATTGTG ATGCCAGGGC GCAATCGCCA GACTCCAGGG AAATGGTCTA CCGCCGCTGG
TTGACGCGGC AATTCGGTTC GGCGGCAACG CTGGATGATT TCAGCTTGGA CGGATTCCGT
TACCTGCGCC TGCTGCGGAA GGCCCGCGGT ACACGTTCCG GTTTTCTCGC CCCGCAGGCG
CTTTTCCGAG GCACGCTAAG CGTGCGTGAT GGGGCAGGCT TCGGCGCACT GTTGGCACGT
GGCATTGGCC GCCATCGCGC CTTCGGTTTC GGCATGCTGC TGTTGAGGCC GGCCCCATGA
 
Protein sequence
MTASLYMIEL RPDPAALIRF AQDQGLNTHQ DQDLGYATHA WLKALCGELA PKPFRLLQDG 
RNLRPPRLLG FSAHDGTRLT EHARAFASPL AAQVCSLADG IAFKPMPESW PNGRKLGFEV
MACPISRLGR NEDDVYRRHL RDCDARAQSP DSREMVYRRW LTRQFGSAAT LDDFSLDGFR
YLRLLRKARG TRSGFLAPQA LFRGTLSVRD GAGFGALLAR GIGRHRAFGF GMLLLRPAP