Gene MCA0872 details

Gene Information

• Locus tag: MCA0872
• Symbol: potA
• ID: 3104271
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: -
• Start bp: 918462
• End bp: 919619
• Gene Length: 1158 bp
• Protein Length: 385 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 637170073
• Product: putrescine/spermidine ABC transporter ATPase protein
• Protein accession: YP_113366
• Protein GI: 53804959
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components
• TIGRFAM ID: [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGCCCAT CCCGACGGCC CAGGTTCCGG AACATCCTGG AAAATCGGAC AATAGCGGCC 
ATGACCCGAT CCACCATCGC CAGTTTCCGC GCCGTTTCCA AGCACTACGG CAGTCACTGC 
GCCCTCCGCG ACTTCAATCT GGAACTCCGG GAAGGCGAGC TGCTCACCCT CCTCGGCCCG 
TCGGGCTGCG GCAAGACCAC GGTGCTGCGC CTTTTGGCCG GTCTGGAGAT TCCCGATTCG 
GGCGAAATCT TCCTGGACGG GCGAACACTC GCCGGCGTGC CGCCGGAAGC GCGTAACGTC 
AACACGGTAT TCCAGAGCTA TGCCCTTTTC CCCCATCTGA GCGTGGCCGA GAATGTCGCC 
TTCGGCCTGC GGATGAAAAA GCTCGGCAGC GCGGAAATCC GGGCGAGAAC CGCGGAGGCA 
TTGCGCATGG TGCGTCTGGA CGGGCTGGGC GGGCACCGGC CGCTACAGCT GTCGGGCGGC 
CAGCAGCAGC GCGTGGCGCT GGCCCGCGCT CTGGTCAACC GTCCGCGGGT CCTGCTGCTG 
GATGAATGCT TGAGCGCCCT GGACTATCAA CTGCGGCGCG AGATGCAGCT GGAACTCAAG 
GGTCTGCAGA GGCAGACCGG CATCACCTTC GTCTTCGTGA CCCACGACCG GGAAGAAGCT 
TTGTCGATGT CGGACCGTAT CGCCGTGATG CGGACGGGAC GGATCGAACA ACTGGGACCG 
CCCCGCGACA TCTACGAGCG GCCGGCGAAC CTGTTCGTGG CGCAGTTCGC GGGTGAGAGC 
AACGTTCTGG AAGCGACCGT CACGGCGATC ACGGCTCCGG ACAGCCTGAT CGTCGAGCTG 
GCAGGGACGC CGCTGACCGT GCGAACCGAC CGGCGATTCC GCGTCGGCGC CAGGCTCGTC 
CTGGTGCTCC GGCCGGAGGA CCTGCACGTG CACGATGATG CCGCCGCCGA AGGCGGCCTC 
GCCGGACATG TGCTGGAACG AACCTACCGC GGCGTGACCC TGGACACAGT GATCGCCCTG 
GATGCCGGAC CGCGGATCAA GACCAGCGAA TTCTTCCGCG AGGACACGCC GGCTCTGGAT 
CATCCGCCCG GCCAGCGGGT ACGGGTGAGC TGGACGCCGG GCTGGGAAAT CGTGCTTCCC 
CATGACCCAG AGACCTGA 

 

Protein sequence

MRPSRRPRFR NILENRTIAA MTRSTIASFR AVSKHYGSHC ALRDFNLELR EGELLTLLGP 
SGCGKTTVLR LLAGLEIPDS GEIFLDGRTL AGVPPEARNV NTVFQSYALF PHLSVAENVA 
FGLRMKKLGS AEIRARTAEA LRMVRLDGLG GHRPLQLSGG QQQRVALARA LVNRPRVLLL 
DECLSALDYQ LRREMQLELK GLQRQTGITF VFVTHDREEA LSMSDRIAVM RTGRIEQLGP 
PRDIYERPAN LFVAQFAGES NVLEATVTAI TAPDSLIVEL AGTPLTVRTD RRFRVGARLV 
LVLRPEDLHV HDDAAAEGGL AGHVLERTYR GVTLDTVIAL DAGPRIKTSE FFREDTPALD 
HPPGQRVRVS WTPGWEIVLP HDPET