Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA0871 |
Symbol | potB |
ID | 3103110 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | - |
Start bp | 917624 |
End bp | 918478 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637170072 |
Product | spermidine/putrescine ABC transporter, permease protein PotB |
Protein accession | YP_113365 |
Protein GI | 53804960 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCAGA GACCTGAGAT CCTCAAAACC GTGACGGTCG GCCTTCTGGC CGGCTGGCTG TTGTCGTTCG TGCTGGCACC CACCCTGCTG GTGGTGGGGC TGAGCCTCCT CAGCCGGAGC CCGGCGGGCT TCGCCGGCGG GCCCGTGACG CTCGACAACT ACCGCCGGCT GGCCGACCCG ATCTATCTGC ATGTCTTCGC CGAGTCTTTC GCCACGGCGT TCATCGCCAC CCTGCTCTGC CTGCTGCTGG GCTATCCCTT CGCCTATGGC CTGGCCCGCG CCCGGCCAGG GCTGCGCCCA CTGCTGCTGA TCCTGGTGAT CGTGCCTTTC TGGACCAGCT CGCTGGTGCG CATCTACGCC ATCCGCGGCC TGCTCGCGGC CAAGGGAGCG CTGAACCACC TGCTGCTGGC CGCGGGGCTG AGCGATCAGC CGGTGCGGCT GCTCTACACC CAGACCGCCG AGATCGTCGG CCTGGTCCAC GTGCTGCTGC CGTTCATGAT CCTGCCGCTG TACGCCAGCC TGGAAAAGCT CGATCCCCGC CTGCTGGAAG CGGCCCGGGA CCTCGGCGCC GGCCCCTTCC GGAGATTCCG GCACGTGGTC CTGCCATTGA CCCTGCCCGG CGTCGTCGCC GGCTGCCTGC TGGTGTTCCT GCCGGCCCTG GGCCTGTTCT ACGTAGGCGA CGTGCTGGGC GGTTCGCGCC ATCTGCTGGT CGGCAACCTG CTCAAGGACC AGTTCCTAGA GGCCCAGGAC TGGCCTTTCG GCGCCGCCGC CAGCCTGGTG CTGATCGGAC TGCTGCTGGC TTTCCTGGCG CTCTATGCGT ATGCGGCGAA ACGCATCGCC CCGGACGACG GTTAG
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Protein sequence | MTQRPEILKT VTVGLLAGWL LSFVLAPTLL VVGLSLLSRS PAGFAGGPVT LDNYRRLADP IYLHVFAESF ATAFIATLLC LLLGYPFAYG LARARPGLRP LLLILVIVPF WTSSLVRIYA IRGLLAAKGA LNHLLLAAGL SDQPVRLLYT QTAEIVGLVH VLLPFMILPL YASLEKLDPR LLEAARDLGA GPFRRFRHVV LPLTLPGVVA GCLLVFLPAL GLFYVGDVLG GSRHLLVGNL LKDQFLEAQD WPFGAAASLV LIGLLLAFLA LYAYAAKRIA PDDG
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