Gene MCA0871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCA0871 
SymbolpotB 
ID3103110 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylococcus capsulatus str. Bath 
KingdomBacteria 
Replicon accessionNC_002977 
Strand
Start bp917624 
End bp918478 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content68% 
IMG OID637170072 
Productspermidine/putrescine ABC transporter, permease protein PotB 
Protein accessionYP_113365 
Protein GI53804960 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1176] ABC-type spermidine/putrescine transport system, permease component I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCAGA GACCTGAGAT CCTCAAAACC GTGACGGTCG GCCTTCTGGC CGGCTGGCTG 
TTGTCGTTCG TGCTGGCACC CACCCTGCTG GTGGTGGGGC TGAGCCTCCT CAGCCGGAGC
CCGGCGGGCT TCGCCGGCGG GCCCGTGACG CTCGACAACT ACCGCCGGCT GGCCGACCCG
ATCTATCTGC ATGTCTTCGC CGAGTCTTTC GCCACGGCGT TCATCGCCAC CCTGCTCTGC
CTGCTGCTGG GCTATCCCTT CGCCTATGGC CTGGCCCGCG CCCGGCCAGG GCTGCGCCCA
CTGCTGCTGA TCCTGGTGAT CGTGCCTTTC TGGACCAGCT CGCTGGTGCG CATCTACGCC
ATCCGCGGCC TGCTCGCGGC CAAGGGAGCG CTGAACCACC TGCTGCTGGC CGCGGGGCTG
AGCGATCAGC CGGTGCGGCT GCTCTACACC CAGACCGCCG AGATCGTCGG CCTGGTCCAC
GTGCTGCTGC CGTTCATGAT CCTGCCGCTG TACGCCAGCC TGGAAAAGCT CGATCCCCGC
CTGCTGGAAG CGGCCCGGGA CCTCGGCGCC GGCCCCTTCC GGAGATTCCG GCACGTGGTC
CTGCCATTGA CCCTGCCCGG CGTCGTCGCC GGCTGCCTGC TGGTGTTCCT GCCGGCCCTG
GGCCTGTTCT ACGTAGGCGA CGTGCTGGGC GGTTCGCGCC ATCTGCTGGT CGGCAACCTG
CTCAAGGACC AGTTCCTAGA GGCCCAGGAC TGGCCTTTCG GCGCCGCCGC CAGCCTGGTG
CTGATCGGAC TGCTGCTGGC TTTCCTGGCG CTCTATGCGT ATGCGGCGAA ACGCATCGCC
CCGGACGACG GTTAG
 
Protein sequence
MTQRPEILKT VTVGLLAGWL LSFVLAPTLL VVGLSLLSRS PAGFAGGPVT LDNYRRLADP 
IYLHVFAESF ATAFIATLLC LLLGYPFAYG LARARPGLRP LLLILVIVPF WTSSLVRIYA
IRGLLAAKGA LNHLLLAAGL SDQPVRLLYT QTAEIVGLVH VLLPFMILPL YASLEKLDPR
LLEAARDLGA GPFRRFRHVV LPLTLPGVVA GCLLVFLPAL GLFYVGDVLG GSRHLLVGNL
LKDQFLEAQD WPFGAAASLV LIGLLLAFLA LYAYAAKRIA PDDG