Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA0869 |
Symbol | potD |
ID | 3103639 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | - |
Start bp | 915687 |
End bp | 916739 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637170070 |
Product | spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein PotD |
Protein accession | YP_113363 |
Protein GI | 53804962 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGCTG CTCAAAGACC GGCACTGATC CGGCGGGCCG CGTTCTTGCT CGTGGCATTC CTGGTCCCTG TCGCGGCCGG GCAGCGGGAA CTGCACTTCT TCAACTGGTC GGATTATCTG CCGCCGGCGG TGCTGGAGAA CTTCACCCGC GAGACCGGCA TCCAGGTGCA CTACGCCACC TACGACAGCA ACGAGGCAAT GTATGCCAAG GTCAAGCTGC TCGAAGGCGG CGGCTACGAC TTGGTGGTGC CGTCCACCTA TATGGTCGAC CGGATGCGCA AACAAGGCCT GCTGCGACCG CTGGATCGCT CGCTGCTGCC CCATTTCGGC AATCTCGATC CGCATCACCT CGACTTGCCG TTCGACCCAG AGAATCGCTA CAGCGTGCCC TATCTGTGGG GAATGACCGG AATCGGGGTC AACGCCGAAC GGATAGACCC TGCCAGTCTG CACGACTGGG CCGACCTCTG GCAGCCACGG TTCCGCCGCG CCCTACTGCT GCCCAACGAC ATGCGGGAGG TGTTCCACAT GGCCATGAGG GTGCTGGGGC TGCCGGTCAA TTCGACCGAC CCCGCCCACA TCGACGCGGC CTACCGCAAG CTGCGCGCAC TGATGCCCAA TGTGCGCCTG TTCAGCTCCG ACGCGCCTCA GATCCTGTTC ATCACCGGCG AAGTGGATGC GGGGATGATC TGGAACGGCG TGGCCTACCT GGCCGCGCGG GAGACCCCGG CGATCCGCTT CGTTCAGCCC CCGGGAGGGC CGCTGCTGTG GATGGACAAC TTGGCGATCC TCAGGAACGC CACAAACCCG GACGAAGCGC ACGCACTCAT CGACTACCTG CTGCAACCGG AAGTAGCCCG GTTGATAAGC GAGACCGTGG GCTACGCCAC GCCGAATGCC GCCGCCATCG CCATCCTGCC GCCCGAGATC AGGAACGACC CCTTGATCTA CCCACCGGCG GACGTCCTGG AACGCGGGGA GTACCAGGTG GACCTGGGTG AGGCGATCGG ACTCTACACG GAATACTGGG AGCGACTGAA AGCAGGACAG TGA
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Protein sequence | MAAAQRPALI RRAAFLLVAF LVPVAAGQRE LHFFNWSDYL PPAVLENFTR ETGIQVHYAT YDSNEAMYAK VKLLEGGGYD LVVPSTYMVD RMRKQGLLRP LDRSLLPHFG NLDPHHLDLP FDPENRYSVP YLWGMTGIGV NAERIDPASL HDWADLWQPR FRRALLLPND MREVFHMAMR VLGLPVNSTD PAHIDAAYRK LRALMPNVRL FSSDAPQILF ITGEVDAGMI WNGVAYLAAR ETPAIRFVQP PGGPLLWMDN LAILRNATNP DEAHALIDYL LQPEVARLIS ETVGYATPNA AAIAILPPEI RNDPLIYPPA DVLERGEYQV DLGEAIGLYT EYWERLKAGQ
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