Gene MCA0869 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCA0869 
SymbolpotD 
ID3103639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylococcus capsulatus str. Bath 
KingdomBacteria 
Replicon accessionNC_002977 
Strand
Start bp915687 
End bp916739 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content64% 
IMG OID637170070 
Productspermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein PotD 
Protein accessionYP_113363 
Protein GI53804962 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0687] Spermidine/putrescine-binding periplasmic protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGCTG CTCAAAGACC GGCACTGATC CGGCGGGCCG CGTTCTTGCT CGTGGCATTC 
CTGGTCCCTG TCGCGGCCGG GCAGCGGGAA CTGCACTTCT TCAACTGGTC GGATTATCTG
CCGCCGGCGG TGCTGGAGAA CTTCACCCGC GAGACCGGCA TCCAGGTGCA CTACGCCACC
TACGACAGCA ACGAGGCAAT GTATGCCAAG GTCAAGCTGC TCGAAGGCGG CGGCTACGAC
TTGGTGGTGC CGTCCACCTA TATGGTCGAC CGGATGCGCA AACAAGGCCT GCTGCGACCG
CTGGATCGCT CGCTGCTGCC CCATTTCGGC AATCTCGATC CGCATCACCT CGACTTGCCG
TTCGACCCAG AGAATCGCTA CAGCGTGCCC TATCTGTGGG GAATGACCGG AATCGGGGTC
AACGCCGAAC GGATAGACCC TGCCAGTCTG CACGACTGGG CCGACCTCTG GCAGCCACGG
TTCCGCCGCG CCCTACTGCT GCCCAACGAC ATGCGGGAGG TGTTCCACAT GGCCATGAGG
GTGCTGGGGC TGCCGGTCAA TTCGACCGAC CCCGCCCACA TCGACGCGGC CTACCGCAAG
CTGCGCGCAC TGATGCCCAA TGTGCGCCTG TTCAGCTCCG ACGCGCCTCA GATCCTGTTC
ATCACCGGCG AAGTGGATGC GGGGATGATC TGGAACGGCG TGGCCTACCT GGCCGCGCGG
GAGACCCCGG CGATCCGCTT CGTTCAGCCC CCGGGAGGGC CGCTGCTGTG GATGGACAAC
TTGGCGATCC TCAGGAACGC CACAAACCCG GACGAAGCGC ACGCACTCAT CGACTACCTG
CTGCAACCGG AAGTAGCCCG GTTGATAAGC GAGACCGTGG GCTACGCCAC GCCGAATGCC
GCCGCCATCG CCATCCTGCC GCCCGAGATC AGGAACGACC CCTTGATCTA CCCACCGGCG
GACGTCCTGG AACGCGGGGA GTACCAGGTG GACCTGGGTG AGGCGATCGG ACTCTACACG
GAATACTGGG AGCGACTGAA AGCAGGACAG TGA
 
Protein sequence
MAAAQRPALI RRAAFLLVAF LVPVAAGQRE LHFFNWSDYL PPAVLENFTR ETGIQVHYAT 
YDSNEAMYAK VKLLEGGGYD LVVPSTYMVD RMRKQGLLRP LDRSLLPHFG NLDPHHLDLP
FDPENRYSVP YLWGMTGIGV NAERIDPASL HDWADLWQPR FRRALLLPND MREVFHMAMR
VLGLPVNSTD PAHIDAAYRK LRALMPNVRL FSSDAPQILF ITGEVDAGMI WNGVAYLAAR
ETPAIRFVQP PGGPLLWMDN LAILRNATNP DEAHALIDYL LQPEVARLIS ETVGYATPNA
AAIAILPPEI RNDPLIYPPA DVLERGEYQV DLGEAIGLYT EYWERLKAGQ