| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA0859 |
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| Symbol | dapF |
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| ID | 3104609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | + |
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| Start bp | 907022 |
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| End bp | 907849 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637170060 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_113353 |
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| Protein GI | 53804981 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGCGTT TCACCAAGAT GCAGGGGCTG GGCAACGACT TCGTCGTGAT CGATGCCATT
CATCAGACAG TGAACCTGGA TGAGGCGGCA TTGCGCCGGC TGGCCGACCG GCATTACGGC
ATAGGCTGCG ACCAGATCCT GCTGGTGGAG CCGCCGGCTT CCGACGAGGT GGATTTCCGC
TATCGGATTT TCAACGCTGA CGGCGGAGAG GTCTCGCAGT GTGGCAATGG CGCGCGCTGC
TTTGCCCGCT TCGTGCGCGA GAAGGGGCTC ATCGACCGCG ACGAGATCCG GGTGGAAACC
GCGGCCGGCC GCATGGTCCT GTGGCTGGAG GCGGGCGGTG AAGTCAGGGT CGAAATGGGA
GTGCCTCGCC ATGCGCCTGC CGAGGTCCCG CTGCTGGCGG ATCGGGAGCG GTCGGTCTAC
ACGGTGAACG TCGAGGGCGT GGACTGGCAG TTCGGCGCGG TCTCCGTGGG CAATCCCCAT
GCGGTGATCA CGGTAGCCGA TGTCGACGAG GCGCCGGTGG CGCGCGTCGG CACGGTGCTG
GAACGGCACG AGCTATTCCC CGAACGCGCC AACATCGGTT TCATGCAGGT CCTGGATCTG
CATCATGCGC GCCTCAGGGT CTATGAGCGT GGGACGGGGG AAACCCTGGC CTGTGGCAGT
GGCGCCTGTG CCGCCGCAGT GGTCGGCATA TTGCAGGGGA CGCTGGAAAG TCCCGTGCGC
ATCGACCTGC CGGGCGGCAC GCTGCGGATC GGCTGGCAGG GAAGGGGGAC GCCGGTTTAC
CTGAGTGGCC CGGCAGTTAC CGTGTTCGAG GGGAGGATGG CAACATGA
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| Protein sequence | MLRFTKMQGL GNDFVVIDAI HQTVNLDEAA LRRLADRHYG IGCDQILLVE PPASDEVDFR
YRIFNADGGE VSQCGNGARC FARFVREKGL IDRDEIRVET AAGRMVLWLE AGGEVRVEMG
VPRHAPAEVP LLADRERSVY TVNVEGVDWQ FGAVSVGNPH AVITVADVDE APVARVGTVL
ERHELFPERA NIGFMQVLDL HHARLRVYER GTGETLACGS GACAAAVVGI LQGTLESPVR
IDLPGGTLRI GWQGRGTPVY LSGPAVTVFE GRMAT
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