Gene MCA0820 details

Gene Information

• Locus tag: MCA0820
• Symbol: parE
• ID: 3103701
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: +
• Start bp: 861907
• End bp: 863793
• Gene Length: 1887 bp
• Protein Length: 628 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 637170025
• Product: DNA topoisomerase IV subunit B
• Protein accession: YP_113319
• Protein GI: 53805052
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit
• TIGRFAM ID: [TIGR01055] DNA topoisomerase IV, B subunit, proteobacterial

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.676318
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACGAAG TTTACGATGC CTCAGCCATC GAAGTCCTGA GCGGCCTGGA TCCGGTCCGC 
CGCCGGCCAG GCATGTACAC CGACACCACC CGCCCCGACC ATCTCGCCCA GGAGGTCATC 
GACAACGCAG TGGATGAGGC GCTGGCCGGT TTCGCCCGCC TCATCGAGAT CCGGCTCCTG 
GCGGACGGCG GCCTGGAAGT GCGGGACGAT GGCCGTGGCA TGCCGGTGGA CATCCATCCC 
GAACTTGGCG TGTCCGGTGT CGAGGTGATC CTGACCAGGC TTCATGCCGG CGGCAAATTC 
TCCCGGAAGG CTTATCGCTA TTCCGGCGGC CTGCACGGCG TCGGCGTCTC TGTGGTCAAT 
GCGCTGTCGC TGCGGCTGGA GGTCGAAGTG CGACGTGACG GGAAAGTCCA TGCCATCGCT 
TTCGAAAAGG GCGAAAAGGT GGGGGATCTC ACCGAGACCG GCACGACGCC CAGGCGCGCA 
ACCGGTACGA CGGTGCGATT CTGGCCGGAG GCACATTATT TCGACAATGC CCGGTTTTCC 
CGCTCGCGTC TCAAACATTT GCTGCGCGCC AAGGCTGTGT TGTGCCCAGG GCTGGAAATC 
CGGATGACCG ACGACGCCAG CGGCGAAACC GAAACCTGGT GTTATCGGAA TGGTCTGCCG 
CAGTACCTGC TGGACCAGTT GCAGGGATGC GCCTGCATTC CGGATGAGCC GTTCACCGGC 
GCGATGGAGG GTCGGCAGGA GGCGGTGGAG TGGGCCGTGC TCTGGTGTCC GGAAGGCGCG 
GCGCCGGTGG CCGAGAGTTA CGTCAACCTG GTGCCGACGG TGCAGGGCGG TACCCACGTC 
AACGGCCTAC GCACGGGACT GACCGAGGCG GTGCGGGAGT TCTGCGAGTA CCGGAACCTG 
TTGCCGCGCG GCATCAAGAT CGTGCCGGAC GACGTCTGGG AGCGCTGCAA TCACGTCCTC 
TCGGTAAAGA TGCAGGAGCC GCAGTTCGCC GGCCAGACCA AAGAACGGCT GAATTCGCGC 
GAATGCGCTT CGTTCGTCTC GGGGGTGGTG AAGGATGCTT TCAGCCTCTG GTTGAACCAG 
CATCCCGCGG TCGGCGAGCG CATCGCCGAG CTGGTGATCG AAAGCGCCCA GAAGCGGTTG 
CGGGCCGCCC GTCGGGTCAC CCGCAAGAAG GTCAGCAGCG GGCCGGCGCT GCCCGGCAAG 
CTGGCCGATT GCGCGGCACA GGATGTCAAC CGCACCGAAC TGTTCCTGGT CGAGGGCGAT 
TCCGCCGGCG GTTCGGCCAA GCAGGCGCGC GACAAGGATT TCCAGGCCAT CATGCCCTTG 
CGCGGCAAGA TCCTGAATAC CTGGGAAGTG GAATCCGGCG CTATCCTCGC ATCGCAGGAG 
GTGCATGACA TCAGCCTGGC CATCGGCGTC GACCCCGGTG CCACCGATTT GAGTGGCCTG 
CGCTACGGCA AAATCTGTGT GCTGGCCGAT GCCGATTCCG ACGGCAACCA CATCGCCACC 
CTGCTGTGCG CCCTGTTCCT GCGCCATTTC CGCGCCCTGG TCAAGGCCGG CCACGTGTTC 
ATCGCCATGC CGCCCTTGTA CCGCATCGAC GTCGGCAAAC AGGTGTATTA CGCGCTGGAC 
GAGGCCGAAA AAAAGGGCGT GCTGGATCGT ATCGAGGCCG AGAAGATCAA GGGTAAGGTC 
AATGTGCTGC GCTTCAAGGG CCTGGGCGAG ATGAACCCCG TCCAGCTGCG CGAAACCACC 
ATGAATCCCG ACACCCGGCG GCTGGTGCAG TTGTCGCTGG ACGACGCCGC TGCGACCGAT 
GAGCGCCTCG ACATGCTGTT GGCCAAGCGG CGGGCAGGGG ACCGTCGCGT CTGGCTGGAG 
GAAAAGGGCA ATCTCGCCGA CATCTGA 

 

Protein sequence

MNEVYDASAI EVLSGLDPVR RRPGMYTDTT RPDHLAQEVI DNAVDEALAG FARLIEIRLL 
ADGGLEVRDD GRGMPVDIHP ELGVSGVEVI LTRLHAGGKF SRKAYRYSGG LHGVGVSVVN 
ALSLRLEVEV RRDGKVHAIA FEKGEKVGDL TETGTTPRRA TGTTVRFWPE AHYFDNARFS 
RSRLKHLLRA KAVLCPGLEI RMTDDASGET ETWCYRNGLP QYLLDQLQGC ACIPDEPFTG 
AMEGRQEAVE WAVLWCPEGA APVAESYVNL VPTVQGGTHV NGLRTGLTEA VREFCEYRNL 
LPRGIKIVPD DVWERCNHVL SVKMQEPQFA GQTKERLNSR ECASFVSGVV KDAFSLWLNQ 
HPAVGERIAE LVIESAQKRL RAARRVTRKK VSSGPALPGK LADCAAQDVN RTELFLVEGD 
SAGGSAKQAR DKDFQAIMPL RGKILNTWEV ESGAILASQE VHDISLAIGV DPGATDLSGL 
RYGKICVLAD ADSDGNHIAT LLCALFLRHF RALVKAGHVF IAMPPLYRID VGKQVYYALD 
EAEKKGVLDR IEAEKIKGKV NVLRFKGLGE MNPVQLRETT MNPDTRRLVQ LSLDDAAATD 
ERLDMLLAKR RAGDRRVWLE EKGNLADI