| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA0810 |
|---|
| Symbol | |
|---|
| ID | 3103062 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylococcus capsulatus str. Bath |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002977 |
|---|
| Strand | - |
|---|
| Start bp | 850020 |
|---|
| End bp | 852674 |
|---|
| Gene Length | 2655 bp |
|---|
| Protein Length | 884 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637170016 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_113310 |
|---|
| Protein GI | 53804822 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1033] Predicted exporters of the RND superfamily |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR03480] hopanoid biosynthesis associated RND transporter like protein HpnN |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.059286 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAAAG GAAAAAAGAC CGCAACGCAG GAAGCCCGGA CGAGTTTTCT CATCCGACTG
ATGCACGGCT GGGAATCCAG GGTACTGACC CACCCATGGC TGGTCTTGTT CGTCGCGTTG
GCCGCCTGCG GCGTGACGCT GCAGTACACG ATGAAATACC TGACCGTGAA TACCAACACG
GCGGACACTC TCTCGACGGA ACTCCCGTTC CAGAAGAACA GGATCCGGTT CGAAACGGAA
TTTCCCCAGG ACGTCTCCAC CGTCGTGTTA CTGGTCGAGG GCAAAACGCC CGAACAGGCG
TCGGATGCCG TCGATGCCCT CCAGCAGAAG CTGGCCGGGC AGCCGGCAAC GATCGAGTCG
GTCTATGTGC CCGACGGCGG CGATTTCTTC GCCCGCAACG GACTCCTTTA TCTGAACCTG
GAAGACCTGG AAAAGGTCAG CCGGGATCTG TCCGCCGCCC AGCCATTCTT CGGACGGCTG
GCCGAAGACA ACAGCCTCGA CGGTTTTTTC GGCATCTATG CCCAGGCGTT GGACGCCAAG
GAATCGGACC TCCCGGTGGA ACTGGGCGCA TTCACCCGCC GCCTCGACGA GGCATTTCGA
GCCGCGCTGG AGCAACGGCC CTACCGCCTG TCCTGGCAAC AGTTGATCAT GGGGCAAAAG
GAAGGCCTCG GCATCACCAA GCGTTTCATC GTCATCCGGC CGAAACTGTT CTTCGAGGAA
CTGATGCCGG CGGCAAAGGC CATGGCCACC ATCGACCGGG CCATAGACGA CATCCGCGCC
GACACCCTGT CCGACGTCCA GGTACGCAAG ACCGGCGAAG TCGTCCTGGA ATACGAGGAA
ATGCTGACGG TGCAGGAAAG CGTCACGGTC GCCGGCCTCG TCTCCACCGT GCTGGTCTGC
CTGACACTGT GGTTGGCCTA CCGGTCGTTC AAGCTGATGT TCGCCACGTT CCTGACACTG
GGTATGGGTT TGGTGTTTTC CATGGGTTTC GCCACCCTGG CGATCGGCCA GCTCAACCTG
ATCTCGATCT CCTTCACCGT GCTGTTCATC GGCATGGGGG ATGCCTATTC GTCCCATTTC
TGCCTGCGGT ACCGGGAGCT GATCCTGCGC GGCATGCCGC AGCGGGCCGC CTTACGCGAA
ACCTTCGCGT CGACGGGCTC GGCGCTGCTC CTGTGTACGC TGACCGCTGC CATCGGCCTC
TACGCGTTCA TCCCGACGGC CTACTCCGGC GTCGCGGAAC TCGGCATCAT CGCCGGCACC
AGCATGTTCA TCGCCCTGGC GACCACCTTC ACCGTGCTGC CGGCGATCAT GAACATATTG
CCTTACAAGC CTTCCCGCCG CGCGGTCCAG CACAGACCGC GCGCGTTGAC CCGGGCCCTG
CTTTCCAACT GGCCGATGCG CTATGCCGCG CCGATCCGGA TACTGACCCT GATCCTGGGC
GTCGCGGCCG CTGCCCTGCT GAGCCGCATC ATGATCGACT TCAATCCGAT CAACCTGCGC
GATCCGTCCA CCGAATCGGT CAAGACTTTC AAGTATCTGC TCAAGTCTCG CGACACCTCG
CCGATGACCC TGGCATCCCT CGCCTCGAAC GAAGAGGATG CCCACGCCAG GATTCGACGG
TTCGAGGAAC TCGCTTCGGT CGACAGCGTG CGCAGCATAT TCGATTTCGT TCCCGACCGG
CAGGACGAAA AACTTGCCGC CATCGCGGAT CTGGCGCTGG TGCTCGGACC TCAGCTGCAG
AATTTTCCGG CCGCCTCCGA GGCCAAGCCG AACCTGCAGA CCCTGGAAAA GCTGCATGCC
GCGCTGCGCA AGCGCCTCGA CAAAAGCCAC GATCCCGATG TCGCCGCGCT GGATGGCAGC
CTCGAACGGC TCCTCGAACA ACTCCGTGCA TCGCCGCCAC AGGCGGTTCA GGACCGCCTC
GACGCTCTCG AAAAAAGCGT TCTGGGAGGC TTGAGGAAAA CCATCACCCA TCTGAGTACC
AGCCTGGAAG CCGAGCCGAT CACTCTGGAC TCCCTTCCCG CGGACATCCG CGAGCGCTGG
ATCAGCAAGG ACGGGCTCTA CCGCCTGCAG ATCTTCCCCA GATACGACCT GAATGATCTG
GACAAACTGC GTGAATTCAT CCAGCAAGCC CAGACGGTGG ACCCCGACGT GACCGACCTG
CCGGTGACCT ACCTGGAATC GATGAACGCC GTCATCGTCG CTTTCGCCCA GGCGTTCGGC
ACGGCGCTCG GTGCGATCAC GCTTCTGCTG CTGCTGATAC TGAGAAACCT CAAGGATACC
CTGCTGGTCC TGTTGCCCCT GCTGCTCGCC TCTCTGTTCA CCGCAGCCGT GACGGTGCTC
ATCCATGTGC CCTTCAATTT CGCCAACATC ATCGCCCTGC CGCTCCTGTT CGGCCTGGGC
GTAGACAACG GCATCCACAT GGCGCACCGG CTGCATTACC TGAAATCCAC GCACGATGCC
TTGCTGGATT CCAGTGAAGC CAAGGGCGTG TTTTACGGCG CCCTGACCAC CGTATTCAGC
TTCGCCAGCC TCGCCTTCAC CCCGCACCCA GGCATGTCGT CCATGGGCAT CCTGCTCGCC
ATCGGCCTGA TGCTGTCCCT GGTCTGTGCC CTGATAGTGC TGCCGGCGTT CGCCGCGCGG
CGGGTCAAGG TCTGA
|
|---|
| Protein sequence | MSKGKKTATQ EARTSFLIRL MHGWESRVLT HPWLVLFVAL AACGVTLQYT MKYLTVNTNT
ADTLSTELPF QKNRIRFETE FPQDVSTVVL LVEGKTPEQA SDAVDALQQK LAGQPATIES
VYVPDGGDFF ARNGLLYLNL EDLEKVSRDL SAAQPFFGRL AEDNSLDGFF GIYAQALDAK
ESDLPVELGA FTRRLDEAFR AALEQRPYRL SWQQLIMGQK EGLGITKRFI VIRPKLFFEE
LMPAAKAMAT IDRAIDDIRA DTLSDVQVRK TGEVVLEYEE MLTVQESVTV AGLVSTVLVC
LTLWLAYRSF KLMFATFLTL GMGLVFSMGF ATLAIGQLNL ISISFTVLFI GMGDAYSSHF
CLRYRELILR GMPQRAALRE TFASTGSALL LCTLTAAIGL YAFIPTAYSG VAELGIIAGT
SMFIALATTF TVLPAIMNIL PYKPSRRAVQ HRPRALTRAL LSNWPMRYAA PIRILTLILG
VAAAALLSRI MIDFNPINLR DPSTESVKTF KYLLKSRDTS PMTLASLASN EEDAHARIRR
FEELASVDSV RSIFDFVPDR QDEKLAAIAD LALVLGPQLQ NFPAASEAKP NLQTLEKLHA
ALRKRLDKSH DPDVAALDGS LERLLEQLRA SPPQAVQDRL DALEKSVLGG LRKTITHLST
SLEAEPITLD SLPADIRERW ISKDGLYRLQ IFPRYDLNDL DKLREFIQQA QTVDPDVTDL
PVTYLESMNA VIVAFAQAFG TALGAITLLL LLILRNLKDT LLVLLPLLLA SLFTAAVTVL
IHVPFNFANI IALPLLFGLG VDNGIHMAHR LHYLKSTHDA LLDSSEAKGV FYGALTTVFS
FASLAFTPHP GMSSMGILLA IGLMLSLVCA LIVLPAFAAR RVKV
|
|---|
| |