| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA0753 |
|---|
| Symbol | gpmA |
|---|
| ID | 3103544 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylococcus capsulatus str. Bath |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002977 |
|---|
| Strand | - |
|---|
| Start bp | 794625 |
|---|
| End bp | 796265 |
|---|
| Gene Length | 1641 bp |
|---|
| Protein Length | 546 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637169962 |
|---|
| Product | phosphoglyceromutase |
|---|
| Protein accession | YP_113256 |
|---|
| Protein GI | 53804931 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0696] Phosphoglyceromutase |
|---|
| TIGRFAM ID | [TIGR01307] 2,3-bisphosphoglycerate-independent phosphoglycerate mutase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGAAAA AGCATCCCAC CTTTCCCGGC ATCTCCGGCC CCGTCGTCAC TGTCGTCATG
GACGGCTTCG GCTACAGTCC CAAGACCACC GGCAACGCCA TCGCCCAGGC CTACACGCCG
ACCCTGGACC GCCTGCTGGC GACGTGCCCC CATACCCTCC TCAAGGCGCA TGGCAAAGCC
GTCGGCATGC CCAGCGATGA CGACATGGGC AATTCCGAGG TCGGCCACAA CGCGCTGGGT
TCAGGCCAAA TCTACCATCA GGGCGCCGCG CTGGTCGCTG AAGCGATCGC CTCCGGTGCG
CTGTTCGAAG GCACGGCATG GCGGGAAATC ATGGACAATG CGCGGCAGCA TGGCTCAACC
CTGCATTTCA TCGGCCTGCT CTCCGACGGT AACGTCCATT CCCACATCGA CCACCTCAAA
GCGATGATCG TCCGGGCCAA AGCCGAAGGC CAACGGCGGG TGCGCATCCA TATCCTGCTG
GACGGCCGGG ACGTGCCCGA AACCTCGGCA CTGGAATATG TCGGACCGTT CGAAGCGTTC
CTCGCGGAAC TCCGGGACGA AACCTTCGAC GCCCGCATCG CCAGCGGCGG CGGGCGCATG
AACATCACCA TGGACCGCTA CGAGGCCGAC TGGGGCATGG TCGAACGCGG CTGGCACACC
CATGTGCTGG GCGAGGCGCG GCACTTCGAA TCGGCGACCC AGGCCATCGA GACCCTGCGT
GCGGAGCATA CCGGCATCAT CGACCAAGAC CTGCCACCGT TCGTCGTCGC CCACGACGGT
GAGCCGGTGG GTCAAATATT CGACAAAGAC AGCGTGATCT TCTTCAACTT CCGCGGCGAC
CGGGCGATCG AGATCAGCCG TGCCTTCGAG GAAGAGGAAT TCGCGCCCTT CGACCGCGTA
CGCCATCCCG GCGTAACCTA TGCCGGCATG CTCCAGTACG ACGGCGATCT CGGCATTCCC
AGACGTTACC TGGTGGCGCC TCCGGCCATC CATGGCACGG TGGGCGAATA CCTGGCAGCG
GAAGGCATCA CCCAGCTCGC TATCTCTGAA ACCCAGAAAT ACGGCCACGT CACCTATTTC
TGGAACGGCA ACCGCAGCGG CAAGTTCAAC GAGTCGCTGG AGACCTACGT CGAAATTCCT
TCGGACAGGG TACCGTTCGA ACAACGGCCG TGGATGAAAT CGGCCGAAAT CACCGACGAG
CTGATCCGCC AGATCAAAAC CGGCAGGCAC CGCACCGTCC GCGTCAATTA CGCCAACGGC
GACATGGTCG GGCACACCGG CCACTATCAG GCGACGATCA TCGCAGTCGA AGCCGTGGAT
CTGGCGCTGA GCCGGCTGTT GCCTGTGATA GATGCGCTCG GAGGCGTAGC CCTGATCACC
GCAGACCACG GCAATGCCGA CGAAATGTAT GAGCTGGACA AGAAAACCGG CGAGCCCCAG
CGAACCCCCA GCGGCGCGCC CAAGGCAAAA ACTTCGCACA CGCTCAACTC GGTGCCGTTC
ATCTATTACG ACCGCCTTAA CCGCGCCGTC ATCCAAAATC CGGGCGATGC CGGCTTGAGC
GCCGTGGCAG CCACCACGGT GAACCTGCTG GGATACGAGG CTCCGGACCT GTGGGACCGG
GGACTGCTGG CATTTGGATG A
|
|---|
| Protein sequence | MLKKHPTFPG ISGPVVTVVM DGFGYSPKTT GNAIAQAYTP TLDRLLATCP HTLLKAHGKA
VGMPSDDDMG NSEVGHNALG SGQIYHQGAA LVAEAIASGA LFEGTAWREI MDNARQHGST
LHFIGLLSDG NVHSHIDHLK AMIVRAKAEG QRRVRIHILL DGRDVPETSA LEYVGPFEAF
LAELRDETFD ARIASGGGRM NITMDRYEAD WGMVERGWHT HVLGEARHFE SATQAIETLR
AEHTGIIDQD LPPFVVAHDG EPVGQIFDKD SVIFFNFRGD RAIEISRAFE EEEFAPFDRV
RHPGVTYAGM LQYDGDLGIP RRYLVAPPAI HGTVGEYLAA EGITQLAISE TQKYGHVTYF
WNGNRSGKFN ESLETYVEIP SDRVPFEQRP WMKSAEITDE LIRQIKTGRH RTVRVNYANG
DMVGHTGHYQ ATIIAVEAVD LALSRLLPVI DALGGVALIT ADHGNADEMY ELDKKTGEPQ
RTPSGAPKAK TSHTLNSVPF IYYDRLNRAV IQNPGDAGLS AVAATTVNLL GYEAPDLWDR
GLLAFG
|
|---|
| |