Gene MCA0743 details

Gene Information

• Locus tag: MCA0743
• ID: 3102075
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: -
• Start bp: 782767
• End bp: 783300
• Gene Length: 534 bp
• Protein Length: 177 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 637169947
• Product: hypothetical protein
• Protein accession: YP_113246
• Protein GI: 53804951
• COG category: [S] Function unknown
• COG ID: [COG1934] Uncharacterized protein conserved in bacteria
• TIGRFAM ID: [TIGR03002] lipopolysaccharide transport periplasmic protein LptA

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0171086
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCGCAG AAAACATGAC GTGCGCTAGA ACCAGAACGC TCGGCACCCT TGCGCTGGCC 
TGCCTCTGGC CTGGCCTGAC GTTCGGACTT TCCAGCGACG CCAAGCAGCC GATCTACATC 
GAGGCCGATA CCGCCACCTA CGACGAAGCC ACCGGACAGA CGGTATACGT CGGCCACGTG 
CGTTCGACCC AGGGTAGCCT GATCGTGGAC TCGGACAAGA TGATCGTCTA CCAGAAGGAA 
GGAAAAACCG AAAAGGTCGT AGCCTGGGCG AACCCGGTCC GTCTGAAGCA GACGCCGGAC 
GGCGGGAAGG AGGACATCCA CGGCACCGGC CAGCGTGCCG AATATTTCCC GGAAACCGGC 
ATTCTCATCC TGTACGACAA GGCCGTGGTC TGGCAGGGTG GCGACTCCAC CGAAAGCGAC 
AGGATCGAGT ACGACAGCCA CAAGAATTTC GTGAAGGCGG GCGATCCGCA GTCGAACAAA 
TCACGCGTGC GCGTCAAACT GGCACCGAAG GCCGAAGCCG GGAAACCGAA GTAA 

 

Protein sequence

MSAENMTCAR TRTLGTLALA CLWPGLTFGL SSDAKQPIYI EADTATYDEA TGQTVYVGHV 
RSTQGSLIVD SDKMIVYQKE GKTEKVVAWA NPVRLKQTPD GGKEDIHGTG QRAEYFPETG 
ILILYDKAVV WQGGDSTESD RIEYDSHKNF VKAGDPQSNK SRVRVKLAPK AEAGKPK