Gene MCA0692 details

Gene Information

• Locus tag: MCA0692
• Symbol: recD
• ID: 3105042
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: +
• Start bp: 726869
• End bp: 728680
• Gene Length: 1812 bp
• Protein Length: 603 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 637169902
• Product: exodeoxyribonuclease V, alpha subunit
• Protein accession: YP_113203
• Protein GI: 53805124
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member
• TIGRFAM ID: [TIGR01447] exodeoxyribonuclease V, alpha subunit

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGCCG GCGAATCCGG CTACTCTTCC GAGCATCTGC TGGCCGCCGG CTTCGCCCGT 
CGCTGTCTGC GCTGGGCGAA GGACCCGGCG GCGCCCGGGG TGTTGGAGCG GGCCGCTTTC 
CTGGCCAGTT TCGCCACCAC CGACGGTCAT GTCTGCACCG ATCTGGCCGA ATTGGCCGAA 
GACTTCCCGC AGCACGGCCC GGACTTGTTG CGGACGCTGC TGCTTGGTTC CGGCGTGGTC 
GGCACGCCGG GGGGCGAACC CCGCCCGCTG GTCCTGGATG ACGAAGGGCG GCTCTATCTT 
TACCGCTATT TCGACTATGA GCGTCGCCTG GCATCTGCTT TGCAGCGGCT GGCGCGCGGC 
CGTGACAGTC TGACGCCACC GTCGGAAGCG GTGCGGGAGC AGTTGAACGC TTTGTTTCCT 
CCCGCATCCG GCGGCCCCGA CTGGCAGAAG CTCGCCGCCG CCCTGGCCCT GCTGGGCCGG 
CTCACCGTCA TCAGCGGCGG GCCGGGCACC GGCAAGACCA CCACGGTGGT GAACCTGCTG 
GCCTGTCTGC TCGTCCAGAA TCCGGACTGC CGCATCGCCC TGGCCGCGCC CACTGGCAAG 
GCCGCGGCCC GCATGCTGGA TGCGTTGCGT GAGCGGGCGG CGCATCTGCC CGGGTCTCTC 
AGGGAGAAAC TTCCGGCCGC CGCCAGTACC GTTCACCGTC TGCTGGGCGT GATTCCGGGC 
AGCGGAAATT TTCGCCATCA TGCCGGGAAT CCCTTGGCCG TCGACGTGCT GGTGGTCGAC 
GAGGCGTCGA TGCTCGACCT GGGACTGGCC ACCCGGCTGG TCGAAGCGGT GCCCGTCGAC 
GGCCGGCTGA TCCTGCTGGG CGACAAGGAC CAGCTCGCCG CCGTGGAGGC GGGGGCGGTG 
TTCGCCGAAC TCAGCGCCGA CCCACGGCTG TCACCGCCGG TCATCGAGCG TCTGGCAGCC 
CTGACCCAGA CCGATCCGGC GGCCATCGTC ACTGCCGCGC CCGTCCGTTC CACTCCGCTC 
GAGGATTGTG TGGTCTGGTT CAGCCGCAAC TACCGTTTCC GCAGCGATTC CGGTATTGGA 
CGGCTGGCGG CGCGGGTCAA CTCGGGCGAA GCGGATGCAG TGATCGCGGA ATTGCGGGCC 
GGCGGAGAGA GCGGCGTGAT CTGGCAGGAG GACGGGGCCG CCGCGCCCGG CGCCGGCCTG 
ATCGAGACCC TGCTGGCGGG CTATGCGGAT TACCTGGATG TCATGCGATC CGGCCAGGCT 
GCGCCGGCAG CCGTGTTCGC CGCCTACAAC CGTTTCCGCA TCCTGTGCGC GGTGCGGGAA 
TCCCCGCGCG GGGTGGAGGC GATCAACCGG CTGATCGCCC GGGAATTTCG CCGCCGCCTC 
GGTCTGGGAG CGGACGAACG GGCCGAATGG TATCCTGGTC GGCCAGTGAT GGTTCTGCGC 
AACGACTACG TGCTGAAGCT GTTCAACGGC GACACCGGCA TCGTTCTGGC GGACCCCTCC 
GGAGAACTGC GGGTGCATTT TCCCGATGCC GGCGGCGGAT TCCGCGCCAT CCCCCCGGCC 
AGGCTGCCCG AGCACGAGAC CGCATTCGCC CTGACCGTGC ACAAATCGCA GGGATCGGAG 
TTCGACGAGG TGGCGCTGCT GTTGCCGGAC CGTATCTCGC CGGTCCTCAC CCGAGAGCTG 
GTTTACACCG GTATTACCCG CGCCAGGCGC GCGGTATCCC TCGTCGGCGC CGCGCCGGTG 
CTGGCGGAGG CCATCCGCCG CCGCACCCGC CGCCATTCCG GGCTGATCGC CCGTCTGGAA 
GAGATTGGGT GA 

 

Protein sequence

MSAGESGYSS EHLLAAGFAR RCLRWAKDPA APGVLERAAF LASFATTDGH VCTDLAELAE 
DFPQHGPDLL RTLLLGSGVV GTPGGEPRPL VLDDEGRLYL YRYFDYERRL ASALQRLARG 
RDSLTPPSEA VREQLNALFP PASGGPDWQK LAAALALLGR LTVISGGPGT GKTTTVVNLL 
ACLLVQNPDC RIALAAPTGK AAARMLDALR ERAAHLPGSL REKLPAAAST VHRLLGVIPG 
SGNFRHHAGN PLAVDVLVVD EASMLDLGLA TRLVEAVPVD GRLILLGDKD QLAAVEAGAV 
FAELSADPRL SPPVIERLAA LTQTDPAAIV TAAPVRSTPL EDCVVWFSRN YRFRSDSGIG 
RLAARVNSGE ADAVIAELRA GGESGVIWQE DGAAAPGAGL IETLLAGYAD YLDVMRSGQA 
APAAVFAAYN RFRILCAVRE SPRGVEAINR LIAREFRRRL GLGADERAEW YPGRPVMVLR 
NDYVLKLFNG DTGIVLADPS GELRVHFPDA GGGFRAIPPA RLPEHETAFA LTVHKSQGSE 
FDEVALLLPD RISPVLTREL VYTGITRARR AVSLVGAAPV LAEAIRRRTR RHSGLIARLE 
EIG