Gene MCA0652 details

Gene Information

• Locus tag: MCA0652
• Symbol: cas4
• ID: 3102078
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: -
• Start bp: 686049
• End bp: 686681
• Gene Length: 633 bp
• Protein Length: 210 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 637169863
• Product: CRISPR-associated Cas4 family protein
• Protein accession: YP_113165
• Protein GI: 53804987
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1468] RecB family exonuclease
• TIGRFAM ID: [TIGR00372] CRISPR-associated protein Cas4

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.915701
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACGAAA CATTCCCCAT TCCCCTCTCC GCCCTCCAGC ACTACAGCTA TTGCCCCCGG 
CAATGCGCGC TGATCCACCA GGAACAGATG TTTACCGATA ACGTCTTTAC CCTGCGCGGC 
CGGCGCGTGC ATGAACGGGT AGACGAGCCG GATACTCGCC ATGAACCGGA CGTGCGCATC 
GAGCAGGCGT TGACTCTGTT CAGCGATCGG CTGGGTTTGA CTGGCAAGGC CGACATCGTA 
GAGTTTCTGC CGGACGGCAC GCCGCGCCCG GTGGAATACA AGCACGGCCC GCGACGGCAG 
CGCGAGCACG ATGACGTTCA GGTGGCAGCT CAGGCGCTGT GTCTGGAGGA AATGACAGGC 
AAGGAGGTGC CGGAAGGGGT GATCTACCAT CACAGCTCGC GAAGGCGGCG CGTGGTGCCG 
ATCACACCGG AGTTGCGGAT AAAGACCGAA AGGCTCATCC ACGAAGTACG CGCCCTGTTG 
GCTTCTGGGA AACTGCCGCC GCCGGCGAGT GAGCCGGAAC GCTGCCGGGG CTGTTCCATG 
ATCGAAATCT GCCAGCCGGA GATGCTCAAA TCCGCCGCCG AGATCGACCG GCTCGCGCAA 
ACCCTGTTCG AACCGGAAGA GGACCTTCCA TGA 

 

Protein sequence

MDETFPIPLS ALQHYSYCPR QCALIHQEQM FTDNVFTLRG RRVHERVDEP DTRHEPDVRI 
EQALTLFSDR LGLTGKADIV EFLPDGTPRP VEYKHGPRRQ REHDDVQVAA QALCLEEMTG 
KEVPEGVIYH HSSRRRRVVP ITPELRIKTE RLIHEVRALL ASGKLPPPAS EPERCRGCSM 
IEICQPEMLK SAAEIDRLAQ TLFEPEEDLP