| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA0635 |
|---|
| Symbol | kdsB |
|---|
| ID | 3102776 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylococcus capsulatus str. Bath |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002977 |
|---|
| Strand | + |
|---|
| Start bp | 670473 |
|---|
| End bp | 671246 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637169847 |
|---|
| Product | 3-deoxy-manno-octulosonate cytidylyltransferase |
|---|
| Protein accession | YP_113150 |
|---|
| Protein GI | 53805017 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1212] CMP-2-keto-3-deoxyoctulosonic acid synthetase |
|---|
| TIGRFAM ID | [TIGR00466] 3-deoxy-D-manno-octulosonate cytidylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.203702 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGCGG ATTTCACCAT CGTCATTCCG GCGCGCTACG GTTCGACCCG GCTGCCCGGC
AAGCCTCTGT TGGAACTCGG CGGCAAGCCG ATGATCGCGC ACGTCTGCGA GCGGGCGCTC
GAAGCCGGTG CGGCGGAGGT CGTGGTGGCG ACCGACGACG CGCGCATCGC CGAGGCGGTG
GACGGCCTGC CGGTCACCGC GATGCTGACC CGGACCGAAC ATGCCAGCGG CACCGAGCGC
CTGGCCGAGG TGGCCGAGCG CCGGGCCTGG AGCGACGATA CCCTCGTGGT CAACCTGCAG
GGTGACGAGC CTTTCATGGA CGCCGCCCTG CTGCGCGCCC TGGCAGAGGC GCTGGGGCGG
CGCGAAGACT GCCGGGTGGC GACCCTGGCC GCGCCGATCC ACCGGCCCGA GGAAATCTTC
GATCCCAACG TGGTCAAGGT GGTCACCGAC GGTGAGAACC GGGCGCTGTA TTTCAGCCGC
GCTGCCGTGC CTTGGGACCG CGAGTCCTTC GCCGAAGGAG CGGGGGTGCC GATGCCGGGC
ATGCCTTATC GCCGCCATAT CGGTGTCTAT GCCTACACCG CGTCCTATCT GCGTCGCTAC
GTGGACTTGG AGCCGTCGCC GCTGGAGCAC GTCGAGCGCC TGGAGCAACT GCGCATCCTC
TGGCACGGTG ACCGCATCCT GGTGGTGCCG GTGGAGGGCG CGCCTGCACC GGGTGTGGAT
ACGGCCGCCG ATCTCGAGCG GGCCCGGCGC CATCTGTCCG GCCGGACACC GTAA
|
|---|
| Protein sequence | MPADFTIVIP ARYGSTRLPG KPLLELGGKP MIAHVCERAL EAGAAEVVVA TDDARIAEAV
DGLPVTAMLT RTEHASGTER LAEVAERRAW SDDTLVVNLQ GDEPFMDAAL LRALAEALGR
REDCRVATLA APIHRPEEIF DPNVVKVVTD GENRALYFSR AAVPWDRESF AEGAGVPMPG
MPYRRHIGVY AYTASYLRRY VDLEPSPLEH VERLEQLRIL WHGDRILVVP VEGAPAPGVD
TAADLERARR HLSGRTP
|
|---|
| |