| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA0565 |
|---|
| Symbol | glnD |
|---|
| ID | 3103204 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylococcus capsulatus str. Bath |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002977 |
|---|
| Strand | - |
|---|
| Start bp | 593310 |
|---|
| End bp | 595943 |
|---|
| Gene Length | 2634 bp |
|---|
| Protein Length | 877 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637169780 |
|---|
| Product | protein-P-II uridylyltransferase |
|---|
| Protein accession | YP_113084 |
|---|
| Protein GI | 53805193 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2844] UTP:GlnB (protein PII) uridylyltransferase |
|---|
| TIGRFAM ID | [TIGR01693] [Protein-PII] uridylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.184337 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGACGGAC CGAACTCGGA TAGAGCACAC GACCGGCACG CCTTCGACCG GGTCGCGGCC
TGCAAGGCCC GGATCCAGCA CAACACTGCC GAGCTGGCCG AGCGGTTCCG GACCGGCACG
CCCGTCGCCG ATCTGATCCG GGAGCGTACC GCTTTCATCG ACCACCTGCT CAGCGAAGCC
TGGGACCGGC GCATCGGCCG GGGGGCCACC GACGTGGCGC TGGTGGCCGT CGGCGGCTAC
GGCCGCGGCG AGCTGCTGCT GCATTCCGAT GTCGACCTGC TCATACTCCT CGACGAGGCC
GCACCGTCGT CACGCAAGCA GGACCTGTCC GATTTCCTGC GCCTTCTCTG GGACATCGGC
CTCAAGCCGG GCCACAGCGT GAGGTCGCCT GCCGAATGCG CGGAAGCAGC CCGGACCGAC
CAGACCATCA TCACCAACTT GCTGGAAGGC CGGCTGCTGG TCGGTTCGGC CGCGCTGTGG
GAAGCGGTGA GGAGCGAAAC CGCCCCGGAA CGCATGTGGT CGTCGGCGGC CTTCTTCGAG
GCAAAGATGG CCGAGCAAAG GATTCGCTAC TCCAAGTACC ACAACACCGC CTACAACCTC
GAACCCAACG TCAAGGAAGG TCCCGGGGGC CTGCGCGACA TCCAGCTCAT CGGCTGGATC
ATCCGCCGCC ACAGCGATGC GCGGGGACTG CAGGACCTCG TCGCCCACGG CTGGCTGACG
GATGCCGAAT ACCGGGAACT CAAGGAGGCA CAGGCATTCC TCTGGCGGAT CCGCTTCGCC
CTGCACGCCC TCACCGGCCG CTGCGAAGAC CGGCTGCTGT TCGATTACCA ACGCGAACTC
GCGGGGCTCT TCGGTTACCG GGGCGAGACC AGCAACGAGG TCGTCGAAGG CTTCATGCAG
GATTATTTCC GCACCGTCAC GGGGGTGGAA CGCCTGAACG AGCTGCTGCT GCAGCTGTTC
AACGAAGCCG TGCTGCACCG CGATGACGCG TTCTCGCCCA CGCCCGTCAA CGATCATTTC
CAGGCGGTCA ACGATTACCT CGAGGCCGTC CATCCCGCGG TGTTCCGCGA GCATCCCCTG
GCCTTGCTGG AAGTGTTCCT GATCCTGCAG AAAAACAGCG CGCTGGAAGG CGTCCGCGCC
GCCACCATCC GTCTCATCCG CCAGCATATC CATCTGATCG ACGACGCTTT CCGCAACGAC
CCCGAAGCCT GCCGGCTGTT CATGGACATT CTGCGCCAGC CGGGCGGCGT GACCCATCAG
CTACGGCGGA TGAACCGCTA TGGCGTACTC GCCGCCTACC TGCCCGAATT CGGCCGGGTC
GTCGGCCGCA TGCAATACGA CCTGTTCCAC GTGTACACGG TGGACGAACA CACGCTGTTC
GTGGTCCGGA ATCTGCGGCG TTTCGCCCTG GAGGAATTCC AGCAGGAAAA TCCGCTGTGC
TACGAACTGT TCCAGCTCAT CGAAAAACCC GAGCTGCTCT ATATCGCCGC ATTGATGCAC
GACATCGCCA AAGGCTCGGA CGGCGACCAT TCGGAAGTAG GCGAAAGGAT CGCAGAGGAA
TTCTGCCGGC GCCATCGGAT CGGGCCACGG GAAACTCTGT TGGTGAAGTG GCTGGTGCGG
CACCATCTGG TCATGTCGAT GACAGCACAG CGCAAGGATC TGAGCGATCC GGAAGTCATC
CACGAATTCG CCCAAATCGT GCGCAACCAG AACACACTGA ACCATCTTTA TCTGCTCACC
GTCGCCGACA TACGCGCCAC CAATCCTTCC CTGTGGAACT CCTGGAAGGG CGCGCTGTTG
CAGGAGCTCT ATACCAGCAC CAGCTGGACC CTGCGGCGCG GACTGGATAC CCCGCCGGAC
TACGCCGAAC AGATCTCCGC GGCCAAGGAC GAGGCACGGA CGCTCCTGCA GCGCTTCGGC
CTGGCCGAAG ATGCCATCAC CGCCGTGTGG GAGAACATCG GTGACGATTA TTTCCTCCGC
TTCCTCCCCG AGGAAATCGC CTGGCACACC ACTGCCATCG CCGCCTGCCG GCCGGAACAT
CTGCCGCTGG TCCTGCTGCG GCCGGAAAGC CTGCGCGGCA GTGTCGAGGT GTTCATCTAC
GAACGCAACC GCGACTTCCT GTTCGCCCAG ACCACCGCCG TGCTCGACCA GCTCGGTCTC
ACCGTGCTGG ACGCCAAGAT CATCGCCTCG CGCCAGGGAT TCGCGCTGCT CAGTTTCAAT
GTGCTGGAAC GGTCCGGCAC GGCACCGGAA GGATTGTTCC GCCTGGTCCA GATCTGCGAC
CGGCTGAAAG AAGCGCTGAG TGGCGGCGGC GCTCCGCCGC CTGCAGTCAG CCGTCTGGCC
ACCCGCCAGA TCCGACACTT CACCGTGCCC ACCAAAGTGT TCTTTCACGA CGACCCGCAG
AACCGTTTCA GCATCCTCGA GCTGATCGCC ACCGACCGTC CCGGCCTGCT GTCCAAGGTG
GGACAGGCAT TCATGCGGAC GGGCATACGC CTGCACAATG CTAAAATCTC CACAGTCGGC
AGCCGCGCCG AAGACATCTT CTTCATCACC GACCGGGAGG ACCGGCCGCT GGACGGGGAA
GCGGACCGCG CGGCATTGCG ACGGGTGCTG ATAGAATTCG TCGGCGATCA GTGA
|
|---|
| Protein sequence | MDGPNSDRAH DRHAFDRVAA CKARIQHNTA ELAERFRTGT PVADLIRERT AFIDHLLSEA
WDRRIGRGAT DVALVAVGGY GRGELLLHSD VDLLILLDEA APSSRKQDLS DFLRLLWDIG
LKPGHSVRSP AECAEAARTD QTIITNLLEG RLLVGSAALW EAVRSETAPE RMWSSAAFFE
AKMAEQRIRY SKYHNTAYNL EPNVKEGPGG LRDIQLIGWI IRRHSDARGL QDLVAHGWLT
DAEYRELKEA QAFLWRIRFA LHALTGRCED RLLFDYQREL AGLFGYRGET SNEVVEGFMQ
DYFRTVTGVE RLNELLLQLF NEAVLHRDDA FSPTPVNDHF QAVNDYLEAV HPAVFREHPL
ALLEVFLILQ KNSALEGVRA ATIRLIRQHI HLIDDAFRND PEACRLFMDI LRQPGGVTHQ
LRRMNRYGVL AAYLPEFGRV VGRMQYDLFH VYTVDEHTLF VVRNLRRFAL EEFQQENPLC
YELFQLIEKP ELLYIAALMH DIAKGSDGDH SEVGERIAEE FCRRHRIGPR ETLLVKWLVR
HHLVMSMTAQ RKDLSDPEVI HEFAQIVRNQ NTLNHLYLLT VADIRATNPS LWNSWKGALL
QELYTSTSWT LRRGLDTPPD YAEQISAAKD EARTLLQRFG LAEDAITAVW ENIGDDYFLR
FLPEEIAWHT TAIAACRPEH LPLVLLRPES LRGSVEVFIY ERNRDFLFAQ TTAVLDQLGL
TVLDAKIIAS RQGFALLSFN VLERSGTAPE GLFRLVQICD RLKEALSGGG APPPAVSRLA
TRQIRHFTVP TKVFFHDDPQ NRFSILELIA TDRPGLLSKV GQAFMRTGIR LHNAKISTVG
SRAEDIFFIT DREDRPLDGE ADRAALRRVL IEFVGDQ
|
|---|
| |