| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA0549 |
|---|
| Symbol | |
|---|
| ID | 3103250 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylococcus capsulatus str. Bath |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002977 |
|---|
| Strand | + |
|---|
| Start bp | 569026 |
|---|
| End bp | 569874 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637169764 |
|---|
| Product | RNA methyltransferase |
|---|
| Protein accession | YP_113068 |
|---|
| Protein GI | 53805210 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0566] rRNA methylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.106936 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATACGGA AAACCAGGCC GCCCCGGGCG GGCGGCGCCC CCGGGAAACG CGGAGCCGGG
CCAGCGGTAC GGGCGGCGCG GCCGGCCCAC TCCGGCGCGG CGGAAGAGAA GCTCGGCAAG
ATCGCCGGAC TGTCCGCCGT GGCCGCGGTG TTCCGGCATG AGCCCGAACG GGTGGTGCGG
CTCTACTACG ACGACTCGAT GAAAACGGCG GCCGGCCCCT TCTGCGCCGT GCTGGCGCGG
CTGCGCCGCC CGTACCGCCT GCTGCCGCCG GAGGAAATGG CGCGGGTCGC CGGCACCGTC
CTGCACGGCG GCATCGTCGC CGCGGTCAGG CCGCGCGAGG TGCCGGACCT CACCCTCGAG
ACCGCGCAGC GCTGGGCGAA AGCAGGCGCC GCCACGGTCC TGCTCGATGG CGTGGGCAAT
CCCCACAACC TCGGCGCCAT CGCCCGGACC TTGGCCTTCT TCGGCCTGGG TCATCTGGTC
CTGTCGGACC ATCCGGCCCA AGCCGGCCTG TCCGACGCGG CCTACCGGGT GGCCGAAGGC
GGGCTGGAGT TCCTGGACGT CCGCCGCCTC ACCGGCGCGG CGCAAGCGCT GCGAAGCTTG
CGCCCCCATT TCCATGTCGT CGGTACCGCC CTGCATGCCA GAGGCATTCC CCCGGAAGCC
GTGCCGCGGG ACCGCCGTCC CATTCTGCTG GTGCTGGGCA ACGAGGAAAA CGGCTTGCCG
CCGCCGACCC TCGCCGCCTG CGAAACCGTC GTCACCATTC CGGGCGGCGG GCAGATCCAG
TCTCTGAACG TCTCGGCCAC CGCGGCGATC CTGACGTATT CGCTGCTCCT CCGGCAAGCG
GAACGCTAG
|
|---|
| Protein sequence | MIRKTRPPRA GGAPGKRGAG PAVRAARPAH SGAAEEKLGK IAGLSAVAAV FRHEPERVVR
LYYDDSMKTA AGPFCAVLAR LRRPYRLLPP EEMARVAGTV LHGGIVAAVR PREVPDLTLE
TAQRWAKAGA ATVLLDGVGN PHNLGAIART LAFFGLGHLV LSDHPAQAGL SDAAYRVAEG
GLEFLDVRRL TGAAQALRSL RPHFHVVGTA LHARGIPPEA VPRDRRPILL VLGNEENGLP
PPTLAACETV VTIPGGGQIQ SLNVSATAAI LTYSLLLRQA ER
|
|---|
| |