| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA0548 |
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| Symbol | |
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| ID | 3102811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | - |
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| Start bp | 568423 |
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| End bp | 569019 |
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| Gene Length | 597 bp |
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| Protein Length | 198 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637169763 |
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| Product | RNA pseudouridine synthase family protein |
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| Protein accession | YP_113067 |
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| Protein GI | 53805209 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0167087 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCCGCA TCATTGTCTT CAACAAGCCT TATGGCGTTC TGACCCAGTT CACCGACCGT
GAACACGGCC GGGCGACGCT GGCCGACTTC ATTCCCATCC CCGGGGTCCG TCCCGCCGGC
CGCCTGGACC GCGATTCCGA GGGGCTCATC GTCCTCACCG ACGACGGCCG CCTGCAGGCC
CGGATCGCCG ATCCCCGCCA CAAGATGGCG AAGACCTATC GGGTCCAGGT CGAAGGGCTG
CCCGACGAAG CGGCGCTGAA CCGGCTGCGA CGGGGGGTGC GGCTGAACGA CGGTCTCACC
CTTCCGGCCG AGGCGAACAT CATCCCCGAA CCGGCCTGGC TGTGGCCGCG CGATCCGCCG
GTCCGTTTCC GCGCCACCAT TCCCACCACC TGGCTGGAAC TGGTCATCCG CGAGGGCCGC
AACCGGCAGG TGCGGCGCAT GACGGCGGCG GTGGGCTTCC CGACGCTGCG CCTGATCCGC
TGGGCCATCG GCGCCTGGAC GCTGGAAGGC CTGGCGCCGG GGGAATGGCG GGAGCTGCCG
CCCCCCGCCG GGAAGGGACT CAGGCGCGGC GCTGACGTTC GGCGACGAAG CGGATGA
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| Protein sequence | MSRIIVFNKP YGVLTQFTDR EHGRATLADF IPIPGVRPAG RLDRDSEGLI VLTDDGRLQA
RIADPRHKMA KTYRVQVEGL PDEAALNRLR RGVRLNDGLT LPAEANIIPE PAWLWPRDPP
VRFRATIPTT WLELVIREGR NRQVRRMTAA VGFPTLRLIR WAIGAWTLEG LAPGEWRELP
PPAGKGLRRG ADVRRRSG
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