Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA0547 |
Symbol | |
ID | 3102783 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | + |
Start bp | 564816 |
End bp | 568460 |
Gene Length | 3645 bp |
Protein Length | 1214 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637169762 |
Product | sensory box protein |
Protein accession | YP_113066 |
Protein GI | 53805211 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.428302 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCGGTA TCGCTCATGG CGCCGACGAA TGGCTGGACC TGTTCGCCGC CTCGCTGGGG GATCATCCGG TCTTCGCCTG GGCGCGGTTG GCGGTTTTGA CGATTTCCTT CCTCTGCCTG TTCCATTTCG GCGTCCAGGG GCTGGTCAGC CAGGGTGTCC GGCTGCCCGT GCGGCGGGTT TATCTGGCCC AGGCGCTCGT GTTCGTAGGG GTGGGGCTGC TGTCCCCGAG TGCAGGCGGC GGCTCGAGCG GCGTGTTGTA TGACGCCCTG GGGCTCCCCG GCGCGCTGGC GGCGGTCGGG GCGTTCGTTC GGGCGGCGCG GACCGCGCGA GGACGGTACG ACGTCGCCCT CGTCGCGGCG GCCCTGGCGA TGGCCGTCTT CGCCGTGAGC CTGGGGGTTG CCGGGTCGGG CACGTCCCGT TTTCCTCCGG CCACCCTGAC CGCGCCGCTG CTGCGCGCTC TCTGTGCGTT GGCCATGGGG GCGGGAATCT GGCTTCATTA CCGGCGCTCG GGCGAGCTTC CGGTCCCCGC GGAGGAACTC AGTTCCGGTC TGGGATTCGG TGTCAGGCTG GTCCTGGTCG CGTCGGTCGT GCTGGGGGCT GCATTCGTAT TGACCGAGCT TTTCGGGCAT GCGGCCGACC GGAGCGTCCG CCGCGAGTTG TCGATCCAGG CCGAAACCGT GGCGGCGTCG ATCAACCCGG AGTGGATTCG TCAGGTCCGT ACGGGGGCCA CGGAGGTTCG GGAACGGGAG GAGCATTGGC TCATCAGCCA GCTCCTGCGC ATCGATGCCG CGGACCCCAA ACTCAAGGGC CTTTACCTCC TGATTCCGGC GGAAGGGGGG GCGATGCGCG CCATCGGCTC CAGCGCGGGC GACATCGAGC CACCCCGGAA TGGCGTCGAA GGGCGGGGGT GGCCGAACAC GGAGCATGCG GAAGCCGTGG CCGGCGTGTT TACCAGCGGC CGGTCACGGG TGCTCGGTCT GGCCCATGGG GATGGCAAGG ACACGGTTTC CGCTTTCGCG CCGGTGCGGG ACACGGAGAC CGGGGAGATT TTCGCCGCTC TGGGCCTGGA GATCGACGCG GCGGTGAGGC GGGACCGGGT CGCGGCTTAC CGCGTGGTCG CCATCGCCAT CGCCCTGCTG ATCGCCATGG GCACGCTCGG CTTCGAGGTG AGCCGTCAGC GCCTGTGGCT GTCTTCACGG ATCGCCAAGG CCGAGCGGCG CCGGCTGGCG GAGGCTCAGC GTCTCGCCCG CGTGGGGAGC TGGGTCTATG ACCCGGCGAC GGACCGCATG ACTTGGTCGG AGGAAACCTA CCGGATTTTC GGGCTTCCCT TCGACGGTGA GGTTCCCCAT CGGTATCAGG AGTTCGCCGC CCTGTTTGTC CCGGAAGACC GTGAGCTCAT CGAGGCCGCG CTGCGGGGCG GACGCGACGA TCTGCTCGGG GTGGAACGGC CGCTGTGTGT GAGGCGGGCG GATGGCGCGG TGCGGCAGGT GAACTTCAAG GTCGAACTCC AGGGACGGCG GGGAGATTCG GGGCCGGTGC TGCAGGGTAC CCTGCAGGAC GTCACCGAAC GCTGGGAAGC CGAACGGGCG CTGCGGCAAT CCGAGGAGAG GCTGCGCCTG CACGTCGAAC ACCTGCCGCT GGCGGTGATC GAGTGGGACC TGGATTTCAT CGTCAGCCGC TGGAATCCGG CGGCGGAAAG AATCTTCGGC TACGGTGCGG ACCGGATGAT CGGCCGTTCC GCCGGCATAC TGTTTCCGGA GGACGTACTG GAGCAGGCGG AAGCGATCTG GCGGGAGGTA TCGGGAGGGT CCGGAAACCG TGTCGTCACC GCCAATGTGA CGGCGGACGG CCGCACGATA CGTTGCGAAT GGTACAACAC CCCGCTGACG ACGCCGGATG GCACGGTGAT CGGCGTGGCC TCGCTGGTGG ACGACATCAC CCGGCGCGAG GCGGTCGAGG CCGAGCTGCG GCTGGCGGCG ACGACCTTCG AGACCGACGA AGCCATTCTG ATCGCCGGTG CCGACGGCAG GATTCTGAGG GTCAACGCGG CGTTCAGCCG GATCACGGGC TACCGGCAGG AGGACGTGGT CGGCCGGAAT CCCCGGCTGT TCAAGTCGGG CCTGCATGGC GCGGAGTTCT ACCGGGAGGT CTGGCGCAGC CTCGAACAGA CGGGGCGCTG GCAGGGCGAG ATCTGGAACC GGCGGAAGAA CGGCGAGGTC TATCCCGAGC GCAAGACCAT CACCGCGGTT CGGTCGGCCA ACGGGGACAT CACGCACTAC GTCGCGATCT CCTCGGACAT TTCCGAACTC AAGCGCACGG AAGAAAAGAT CCGCCAGCTC GCCTATTACG ATTCCCTGAC CGGCCTGCCG AACCGGAGTC TGATCTTCGA GCGGCTCACG CAGCAGATGA AAGCGGCGCG GCGCGAGGGA ACCTACGGCG CGCTGCTGTT CATGGACCTG GATTATTTCA AGACCCTGAA CGACTCCCTG GGCCACCACA TGGGCGACCG CCTGCTGGTC CAGGTGGCCG AGCGCCTGAA AAACTGCCTG GAGGACGAGG AAGCGGCGGC CCGCCTCGGG GGGGACGAAT TCGTCGTCCT GCTCGCGCCG GCCAAGCCCA GCGCCTCGGT TGCGGCGGGC CAGGCGATCG TCCATGCGCG GCGGGTGCGC GAGCTGCTCT CGGCGCCGTT TCAGCTCGAC GATTACGTGC ACTACATCTC CGTGAGCATC GGCATCGCGC TGTTTCCCGA CGGCGCGAAC ACCGCCGAGG ATGTGCTCAA ACAGGCGGAC ACGGCCATGT ACGTGGCCAA GAACGAGGGG CGCGACGGCG TCCGTTTCTA CGAGAGCGCG ATGGAGGCCG TCGTCCGCGG CCGGCTGGAG CTGGAAAAGG CCTTGCGGAA GGCGCTGGCC AACGACGAGT TCGAGGTCTA CTACCAGCCG CAGATGCTCG GTGACGGGCG GGTGGTGGGT GCCGAAGCCC TGATCCGCTG GTTCCATCCC GAACGCGGTG CGATCTCCCC CGATCAGTTC ATACCGGTCT GCGAGCAGAA CGGCATGATA CTGCGGGTGG GGGCTATCGT GCTGAGGCGG GCCTGCGCCT GTCTGGCCGA GATTCGGGCG CGGGGCTTGG CCCTGCCGAA GCTTTCCGTG AACGTCAGCC CGCGCCAGTT CATGCGCAGC GACCTGATGA CCCAGTTGGA GCAGTTCTGC CTGGAGAACG GCGTTTCGCC GACGGACCTT TGCCTCGAAC TGACGGAAGG TGTGCTGCTG AACCATACCG AGCTCGCCGT CGCGCAGATC GGGCGCCTGA AGAACCTCGG CGTGAGTTTT TCCATCGACG ATTTCGGAAC GGGCTATTCC TCCCTGGCCT ATCTGAAACA TCTGCCGCTG GACGACCTCA AGATCGCCTC GGCGTTCGTC CGCGATCTGG AGCAGGACAG CAGTGACGCG GCCATCGTCG AGACCATCGT CAGCATGGCG CGCCATCTGG GACTCGACGT CATTGCCGAA GGCGTGGAAA CCCGGACCCA GGTCGAGATC CTGGAGCGTT ACGGCTGCCA CCGGTTCCAG GGCAACTACT TCGCCCGGCC GCTGCCCAAG GACGACTTCA TCCGCTTCGT CGCCGAACGT CAGCGCCGCG CCTGA
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Protein sequence | MFGIAHGADE WLDLFAASLG DHPVFAWARL AVLTISFLCL FHFGVQGLVS QGVRLPVRRV YLAQALVFVG VGLLSPSAGG GSSGVLYDAL GLPGALAAVG AFVRAARTAR GRYDVALVAA ALAMAVFAVS LGVAGSGTSR FPPATLTAPL LRALCALAMG AGIWLHYRRS GELPVPAEEL SSGLGFGVRL VLVASVVLGA AFVLTELFGH AADRSVRREL SIQAETVAAS INPEWIRQVR TGATEVRERE EHWLISQLLR IDAADPKLKG LYLLIPAEGG AMRAIGSSAG DIEPPRNGVE GRGWPNTEHA EAVAGVFTSG RSRVLGLAHG DGKDTVSAFA PVRDTETGEI FAALGLEIDA AVRRDRVAAY RVVAIAIALL IAMGTLGFEV SRQRLWLSSR IAKAERRRLA EAQRLARVGS WVYDPATDRM TWSEETYRIF GLPFDGEVPH RYQEFAALFV PEDRELIEAA LRGGRDDLLG VERPLCVRRA DGAVRQVNFK VELQGRRGDS GPVLQGTLQD VTERWEAERA LRQSEERLRL HVEHLPLAVI EWDLDFIVSR WNPAAERIFG YGADRMIGRS AGILFPEDVL EQAEAIWREV SGGSGNRVVT ANVTADGRTI RCEWYNTPLT TPDGTVIGVA SLVDDITRRE AVEAELRLAA TTFETDEAIL IAGADGRILR VNAAFSRITG YRQEDVVGRN PRLFKSGLHG AEFYREVWRS LEQTGRWQGE IWNRRKNGEV YPERKTITAV RSANGDITHY VAISSDISEL KRTEEKIRQL AYYDSLTGLP NRSLIFERLT QQMKAARREG TYGALLFMDL DYFKTLNDSL GHHMGDRLLV QVAERLKNCL EDEEAAARLG GDEFVVLLAP AKPSASVAAG QAIVHARRVR ELLSAPFQLD DYVHYISVSI GIALFPDGAN TAEDVLKQAD TAMYVAKNEG RDGVRFYESA MEAVVRGRLE LEKALRKALA NDEFEVYYQP QMLGDGRVVG AEALIRWFHP ERGAISPDQF IPVCEQNGMI LRVGAIVLRR ACACLAEIRA RGLALPKLSV NVSPRQFMRS DLMTQLEQFC LENGVSPTDL CLELTEGVLL NHTELAVAQI GRLKNLGVSF SIDDFGTGYS SLAYLKHLPL DDLKIASAFV RDLEQDSSDA AIVETIVSMA RHLGLDVIAE GVETRTQVEI LERYGCHRFQ GNYFARPLPK DDFIRFVAER QRRA
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