| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA0542 |
|---|
| Symbol | |
|---|
| ID | 3103300 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylococcus capsulatus str. Bath |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002977 |
|---|
| Strand | - |
|---|
| Start bp | 557693 |
|---|
| End bp | 559513 |
|---|
| Gene Length | 1821 bp |
|---|
| Protein Length | 606 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637169757 |
|---|
| Product | asparagine synthetase, glutamine-hydrolyzing |
|---|
| Protein accession | YP_113061 |
|---|
| Protein GI | 53805216 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
|---|
| TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGCGGCA TTGCCGGCCT GTTCAACTGC AATCTCCCCG CTGACGAGCT CCGGCTCGAC
CAGGCCGTGG CCAAGCTGAC CCATCGGGGC CCCGACGACC GGGGCATCTT CCTCGACGGC
CGCTTCGGCA TGGGGCATAC CCGCCTCTCC ATCATCGACC TGGCGGGCGG CCACCAGCCC
CTGTTTTCCG AAGACCGGAG GCTGGCGCTG ATAGCCAATG GCGAAATCTA CAATTTCATC
GAACTGCGCT CCGAGCTGAC GGCGGCGGGA TTCCGTTTCC AGACCCAGTC GGATTCGGAG
GTCATCCTCC ATGCCTACCT CGCCTTCGGG GAGGGCTTTT TGGAGCGTAT CCAGGGCATG
TTCGCCTTCG CACTGTACGA TGCCCTCGAA GGACGCCTGA TCCTGGCCCG TGATCGCTTA
GGGATAAAAC CGCTGTTTCT GGCTCGGCGT CCGGACGGCA TCGCCTTCGC CTCCGAAATC
AAGGCCCTGC TGCCCCTGCT CGACCAGCCC CGGGAAATCG ATCCGCAAGG GCTGGCCCAG
TATTTCCAAA ACCAGTTTTC CACCGGCGCC ACGACGGTCC TGCGAGGCGT GGAGCGGGTA
CTGCCGGGCG AAGCCGTGGT CGTCGAAGCC GGAAAAACGA CCCGCCGCTT CCGCTACTGG
TCACCGCTCG CCGTGCGCAC GGAAGAGCTG GATTTCGACG AAGCGGCAGC GCGCTTCGAT
GCGCTGATGG AGCGAGTGAT GGTCGAACAC ATGCGCTCGG ACGTGCCTTT CGGGCTGTTT
CTCTCCGGCG GCGTCGACTC CTCCCTGCTG CTTGCCCTGC TGACCCGGTA TTCCGGCGAG
CCCATCCGCA CCTTCTCGGT CGGTTTTCCC GGCACCTCGC TGACCGACGA ACTGCCGCTG
GCCGAAGGCC TGGCCCGGCG TTTCCGCAGC CGCCACCGCG AGATCCGGCC CGGTCCGCAA
GACATCCTCC ACAGCCTGCC GCTGACCGTA TGGGCGGCGG ACGATCTGAT GCGCGACAAT
GCCAGCCTGC CGACGTCCCT GCTGGCCCGG GCAGCCGGCG AAGAACTGAA GGTGGTGTTC
TCCGGCGAGG GCGGGGACGA AGTGTTCGCC GGCTACGGAC GCTACCGGAC ATCGCCGCTC
GAACGTCTGT TCAAGAGCCT GCTCGCGCCC GGCTCGGGCG GTTTCCGCAC CCGCGGCAGC
TTCCGCGGAC GCTGGCCGAA GACGCTGTTC GGCCCCGCCC TGCTGGCTGC CGCGCAATCG
GCCCGGCGGC CGGTGCAGGA ATCCTGGCGG GAGACGCCGC GGGAATGGAG CGATCTGCAG
CGGATGCAGT ACGTCGACCT CTGCCACGCA CTGCCCGACA ACCTGCTGGT CAAGGCCGAC
CGCATGCTGA TGGCCTGGGG CGTGGAAGGG CGGGTGCCGT TCTTGGACCA CCGCGTCGTC
GAATTCGGCC TGAGCCTGCC CGACCGCCTT AAGATCGAGG GACGCCAGGG CAAGCTGTTC
CTCAAGCGCT GGGGCGAGCG GCTGGTGCCG GCGGAGCAGC TCTATGCCAG GAAGCGCGGC
TTCCACGTCC CCCTGGGCGA ATGGCTGGAC GAGCCTTTTC TCGAACGGCT GAACCGGATT
CTACCGGAAC ACCCGGCACT CACCCCCTGG TTCAAACCCG CCGGCATCCG GGCGCTGATC
GCCCGCTGCC GTGACGAGCG CCAGGGCAGC GCCATGCTCT GGGCCATCAT CCAGTTCGCA
ATCTGGCACC GGCTGTTCAT TTCCGGGAAT GGCGAGCGGC CGGAGGCGCT GACCGATCCC
CTGGAAATCC TGCAGCGCTG A
|
|---|
| Protein sequence | MCGIAGLFNC NLPADELRLD QAVAKLTHRG PDDRGIFLDG RFGMGHTRLS IIDLAGGHQP
LFSEDRRLAL IANGEIYNFI ELRSELTAAG FRFQTQSDSE VILHAYLAFG EGFLERIQGM
FAFALYDALE GRLILARDRL GIKPLFLARR PDGIAFASEI KALLPLLDQP REIDPQGLAQ
YFQNQFSTGA TTVLRGVERV LPGEAVVVEA GKTTRRFRYW SPLAVRTEEL DFDEAAARFD
ALMERVMVEH MRSDVPFGLF LSGGVDSSLL LALLTRYSGE PIRTFSVGFP GTSLTDELPL
AEGLARRFRS RHREIRPGPQ DILHSLPLTV WAADDLMRDN ASLPTSLLAR AAGEELKVVF
SGEGGDEVFA GYGRYRTSPL ERLFKSLLAP GSGGFRTRGS FRGRWPKTLF GPALLAAAQS
ARRPVQESWR ETPREWSDLQ RMQYVDLCHA LPDNLLVKAD RMLMAWGVEG RVPFLDHRVV
EFGLSLPDRL KIEGRQGKLF LKRWGERLVP AEQLYARKRG FHVPLGEWLD EPFLERLNRI
LPEHPALTPW FKPAGIRALI ARCRDERQGS AMLWAIIQFA IWHRLFISGN GERPEALTDP
LEILQR
|
|---|
| |