Gene MCA0530 details

Gene Information

• Locus tag: MCA0530
• Symbol: clpX
• ID: 3103528
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: +
• Start bp: 544429
• End bp: 545715
• Gene Length: 1287 bp
• Protein Length: 428 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 637169743
• Product: ATP-dependent protease ATP-binding subunit ClpX
• Protein accession: YP_113049
• Protein GI: 53805231
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG1219] ATP-dependent protease Clp, ATPase subunit
• TIGRFAM ID: [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX)

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGAGG ATAAACACGG CAAAGACAGC GGCGGCAAGC TCCTGTATTG CTCATTCTGC 
GGGAAAAGCC AGCACGAGGT CCGCAAGTTG ATTGCGGGGC CGGCAGTGTT TGTCTGCGAC 
GAATGTGTCG AGCTGTGCAA CGACATCATC CGCGAGGAAT TGCAGGAGAG CGCCTCCACG 
GGCGCCGACA AGCTGCCCAA GCCGAAGGAG ATCAAGAAAG TTCTGGATGA ATACGTGATC 
GGCCAGGAGA AGGCCAAGCG GATTCTCTCG GTCGCCGTCT ACAACCATTA CAAGCGGCTG 
CGCGCCCAGC AGACCCACAG TAAGAAGAAC GAGGTCGAAC TGGCCAAGAG CAACATCCTG 
CTGATCGGTC CGACCGGTTC GGGCAAGACC TTGCTGGCGG AGACGCTCGC GCGCCTGCTC 
GACGTGCCTT TCACCATCGC CGATGCCACC ACGCTGACCG AGGCGGGCTA TGTGGGTGAG 
GATGTCGAGA ACATCATCCA GAAAATCCTG CAGAAGTGCG ATTACGATGT GGAGAAGGCG 
GAGCAGGGGA TCGTCTACAT CGACGAGATC GACAAGATTT CCCGCAAGGC CGACAACCCC 
TCGATCACCC GGGATGTCTC CGGCGAAGGC GTGCAGCAGG CCTTGCTCAA GCTGATCGAA 
GGGACCGTGG CCTCCGTGCC GCCGCAGGGC GGGCGCAAGC ATCCGCAGCA GGAGTTCCTG 
CAGGTCAATA CCGCCAACAT CCTGTTCATC TGCGGCGGCG CCTTCGCGGG CCTGGAGAAG 
ATCATCCGTT CGCGCTCCGA GCAGGGCGGA ATCGGGTTCG CAGCAGACGT CAAGAGTAAG 
GACGACAGCC GCAATGTCGG CGAGGTGCTC GCCGACGTCG AGGCCGAGGA CCTGATCCGC 
TACGGTCTGA TACCGGAATT CGTCGGGCGC CTGCCGGTGG TGGCGACGCT GGAAGAGCTG 
GACGAGGCGG CCCTGGTGCG CATCCTGACC GAGCCCAAGA ACGCCTTGGT CAAACAGTAC 
CGGCGGCTGT TCGAAATGGA GTCCTGCGAA CTGGAGATCC GTGACGACGC GCTGGGCGCC 
ATTGCCCGCA AGGCCATGGC GCGCAAGACC GGCGCACGGG GCCTTAGGAC CATACTCGAG 
CATACGCTGC TGGATACGAT GTACGAGCTG CCTTCCTCGG AACGGATCTC CAAGGTGGTG 
GTTGACGAAA AAGTCATCAA CGGTGAAAGC GAGCCTCTGA TGATTTACGA CAACAGCCTG 
GAAAAGCAGG CGGCGGCAGC GGACTGA 

 

Protein sequence

MSEDKHGKDS GGKLLYCSFC GKSQHEVRKL IAGPAVFVCD ECVELCNDII REELQESAST 
GADKLPKPKE IKKVLDEYVI GQEKAKRILS VAVYNHYKRL RAQQTHSKKN EVELAKSNIL 
LIGPTGSGKT LLAETLARLL DVPFTIADAT TLTEAGYVGE DVENIIQKIL QKCDYDVEKA 
EQGIVYIDEI DKISRKADNP SITRDVSGEG VQQALLKLIE GTVASVPPQG GRKHPQQEFL 
QVNTANILFI CGGAFAGLEK IIRSRSEQGG IGFAADVKSK DDSRNVGEVL ADVEAEDLIR 
YGLIPEFVGR LPVVATLEEL DEAALVRILT EPKNALVKQY RRLFEMESCE LEIRDDALGA 
IARKAMARKT GARGLRTILE HTLLDTMYEL PSSERISKVV VDEKVINGES EPLMIYDNSL 
EKQAAAAD