Gene MCA0447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCA0447 
Symbol 
ID3105100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylococcus capsulatus str. Bath 
KingdomBacteria 
Replicon accessionNC_002977 
Strand+ 
Start bp459204 
End bp460145 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content66% 
IMG OID637169666 
Productsigma-54 dependent DNA-binding response regulator 
Protein accessionYP_112977 
Protein GI53802310 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCGAAG TGCTCATCGG CCGGTCGCCC GGTTTCGAGG CGCTCATCCG CAGCGCGCGG 
CTGGTGGCTG CGACCGATGT GACCGTCCTC ATCGTGGGCG AAACCGGTAC CGGCAAGGAA 
CTCCTGGCCC GGGCACTCCA GGGCCACAGC CTGCGCGCCG ACCGGCCTTT CGTCACGCTC 
AACTGCGCGG CGCTCCCGGC TTCGGTCGCG GAATCCGAGC TGTTTGGCCA TCGTCGCGGA 
GCTTTCACGG GGGCGGTTTC GGATTTCCCC GGCCGGCTCG AGACCGCCGA TGGCGGCACC 
CTGTTCCTGG ACGAGATCAA TTCGCTGCCT CTGCCGGTGC AGGCCAAGCT TCTGAGGTTC 
CTTGATTCCG GGGAAATCCA GCCGGTCGGC GCCCGGGCTC CGCAGAGGGT GGACGTGCGC 
ATCATCGCGG CGACCAATGC CAACCTGGCC GACAAGATCG ACAAGGGTGA ATTCCGCCGC 
GACCTCTATT ACCGGTTGAG TGTGGTCCCG CTCGAAATCC CTCCCCTGCG CGAACGCGGC 
GGCGACGTGG AACTGCTGCT CCACCACTTC ATGCGTCATT TCGCGCAAAC CCATGCCATT 
CCGCCGGCGG TGTTCGGTCG GGGGGCGGTG CGGCGTCTGA TTGCTTATCC CTGGCCCGGG 
AACATCCGGG AATTGCGGAA CCTCTGTGAA CGCCTCGCCA TCCTGATGCC TGGCCGGGTG 
ATCGAGGAGC AGGATCTCCC CGAGGAAGCC CTGCGCGCCC CGCCACAGGC CAGGCCATTG 
TTCACGCTCC CGGATGAGGG GTTCGAGCTG GAGCGGATGG AAATCGACTT CATCCGCCAG 
GCGCTGCAGC GGACCCAGGG TAACCGGACC CGGGCCGCCC GGCTGCTCGG CCTCACCCGC 
GATCAGCTCA ACTACCGTAT CCAGAAGTAC GGCATCGATT GA
 
Protein sequence
MFEVLIGRSP GFEALIRSAR LVAATDVTVL IVGETGTGKE LLARALQGHS LRADRPFVTL 
NCAALPASVA ESELFGHRRG AFTGAVSDFP GRLETADGGT LFLDEINSLP LPVQAKLLRF 
LDSGEIQPVG ARAPQRVDVR IIAATNANLA DKIDKGEFRR DLYYRLSVVP LEIPPLRERG 
GDVELLLHHF MRHFAQTHAI PPAVFGRGAV RRLIAYPWPG NIRELRNLCE RLAILMPGRV 
IEEQDLPEEA LRAPPQARPL FTLPDEGFEL ERMEIDFIRQ ALQRTQGNRT RAARLLGLTR 
DQLNYRIQKY GID