Gene MCA0442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCA0442 
Symbol 
ID3104840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylococcus capsulatus str. Bath 
KingdomBacteria 
Replicon accessionNC_002977 
Strand+ 
Start bp453638 
End bp454294 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content66% 
IMG OID637169661 
ProductMotA/TolQ/ExbB proton channel family protein 
Protein accessionYP_112972 
Protein GI53802322 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.256552 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCACCG ATACTTCCGC GCTCATCATC AACGTCACCC TTTGGGTGCT GATCTCGTTT 
TCCGTCCTGA CCTGGACCGT CATCCTGCTG AAAGGGGGGC AATACTGGCG GCATGCCGTG 
GGTAACCGCC TGTTCGAGGA AAAATTCTGG AGTGCGGCCT CGCTCGACGA GGCGCGGCTG 
AGGATGGATG AGGCCGGCGG CTGTCCTCTG TACCGGCTGG CGAGCGCGGG TTTCCAGGTG 
TTCGACAGCG GCAACGGCAA CGGTGCGGCC AGCCTGAAGC ACCGCGGGGA TCTGGTGGCG 
ACCCTGGAGC GCAAACTCAA GCGCCAGCTG GAGCGCGAAT CCCGGCTGTC GGATATCGGG 
CTCACGGTCC TGGCGAGCAT CGGTTCCACC GCGCCTTTCG TCGGTCTGTT CGGGACCGTC 
TGGGGCATCA TGCACGCCCT GCAGGACATC AGCCGAAGCG GCAAGGCCAG CCTGGAAGTG 
GTGGCCGGCC CGATCGGCGA GGCGCTGATC GCCACCGCCA TCGGCATCGC CGTCGCGGTG 
CCGGCCGTGC TGGCCTACAA CTTCCTGATG CGGCGCTCGC GCCGCAAGCA GCAGGCGCTG 
GAAATCTTCG CCGAAGACTT CCTGCACCTG GTCGCCGCCG AGACCGCCCA CCGCTGA
 
Protein sequence
MVTDTSALII NVTLWVLISF SVLTWTVILL KGGQYWRHAV GNRLFEEKFW SAASLDEARL 
RMDEAGGCPL YRLASAGFQV FDSGNGNGAA SLKHRGDLVA TLERKLKRQL ERESRLSDIG 
LTVLASIGST APFVGLFGTV WGIMHALQDI SRSGKASLEV VAGPIGEALI ATAIGIAVAV 
PAVLAYNFLM RRSRRKQQAL EIFAEDFLHL VAAETAHR