| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA0424 |
|---|
| Symbol | |
|---|
| ID | 3102888 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylococcus capsulatus str. Bath |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002977 |
|---|
| Strand | + |
|---|
| Start bp | 427847 |
|---|
| End bp | 430600 |
|---|
| Gene Length | 2754 bp |
|---|
| Protein Length | 917 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637169643 |
|---|
| Product | cytochrome c family protein |
|---|
| Protein accession | YP_112954 |
|---|
| Protein GI | 53802357 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGGATTC ACCGGCTACA GATCTGCCCC TGGCTGTGGG CCGTCTGTTT CATCGCCGGA
ATTCTTCCGT CGTATGGCGG GGAGGCGCCT GCCGACAACG GTTTCGACCG GGCCGTACTC
CATCCCGCCA TCCCTCTTCT GGACGAGAGC GGACGCCATG TGCTCGACAG CGGCCTGCCT
TACAGCCCCA AGAACAGCTG CGGCAACGGG TCGGGCAGCG GCTGCCACGA CTATGCCAGG
ATCACCCGCG GCTACCACTT CGAGCAGGGG CGCGACGAAA CCCGCGATGG CTTCGGTAAC
AAACTGGGGT TGCCGCAACT GACCGGCCCC GGCTATTTCG GCGGTTACAA CTGCATGTCC
GGCAATGCGC CGGGCTGGCT GGCCAGGAAG AGCAACGGCA GCGCGGCGGA ATTCGGCGAT
TTCGGCGCGC CCGACCTGGT TCGCTACTGT GGCGCCTGCC ATTCCGGCGG CGGCTGGGGC
GAATTCGACC GTAACGGGGG GCGCTATGAC GAGCAGTCCG CCGAGACGGT CAAGGCTTTC
GACGGCGACT ATTTCAGCCG TCAGTTTCAG GAGCCCGGCA AGACAGGGCA GTACGGCGGT
TCCGGACCTT CCGAAGTGGT GGCATGGGAC TGGAGGAGGA GCGGGGTGCG GGAGGCCGAC
TGCATGCTTT GCCACGCCGA CTTCTCCCGC CTGAAGATAT TCCCTCCCAG TGGATTGGGT
ACGGGCGGTT CCGAGTCCGC GGCGCTGCAG TTCGCCCGTC TGCGCGACGA AAAATTCATC
GCGGGCGGTT TTTTCCGCCA TGCGGCATCG GCCATCTGGG AATTCCTCGA CGTGCGGCCC
GATACGGAAG GCGGCGCGGC GCTCTTGGCG GTGGAGCGCA CTCCTGCCAC GGGTACCGCG
ACGCCGGATT ACCGGCTGGT GCTGGACGAT CAGGGCAATC CCAAGCTGCA CTGGAACCGG
GACGCATTCG ACGAGTCCGG CAAGATCCAG GTACCCATGC TGCGGTTTCC GGCCAGCGAC
AATTGCATGT ATTGCCACAA GACCGGCAAT TCGCGGCGCG GCTTCTACGG CTTCGGGCCT
GAAGTCCGGG TGAGGATGGC GGGCGACGGG ACTACGATCA CCGATTTCCG CACCGACGTG
CACAAAGGCG CGGTCTGGAC CGAGGACAAC GGCCAGGCGC GGGTCATCGA CAACTGCAAC
GCCTGCCATG CCAGGCAGTA CTACAAGTCG CCTGCGGCCA ACGTGGACCT GGATGCCGAC
CACAATTTCC CCAAGGGCAA TGGCGACAAC GACGTCCGTA ACGATCTCGA CAACGCGCCG
CCGCCGGCCT CCTGTGAGCA TTGCCATGAC CAGGCGGCGA AGCCGGCCTT GCCGTCCGGC
CACAAGAACG TACTGGAGGC TCACCGCGAA ATCTGGAAGG CCAACGGTGA CATGCGGGGT
TATCCGGAAA ACACGCTGGA CCGGATCACC CAGACGCACC TCAACGTCGT CGCCTGTCAG
ACCTGCCATA TTTCCAGGCT GGCCGACAAC GGCAAGGAAT TCCCCATGCG TTACCGCTAC
CGGGTCGGCT ACGGCGGACG GCTGAAGATC TTCCCCTATA AGCCGGCCTA CCGCTATTTC
GTCCAGGATC GGACCAGCGG GCGGGTGTTG AACCGCTACG AGCGCTTCTC CGTGATCGAG
GAGCGGACGG GTTCGGACGG CGGAAACTAC GGAGCGATTC TCGAACCCGC CAGCGGCAAG
GAACTGGGGC GGGTGGTGAT GAACGGGGAT GAATTCGGCG AGCCCCCGAC TTTCGCCGAC
TACAAGGCGC TGAAACAGGC CTACGACGCC TTGCTGGGGA TGAAGGGCTA CGCCATGCCG
AACGTCCGCT TCGTCTACAT CGAATCCAAT GAATACGCGC TCAGTCATGC AACGCGGCCA
TCGCCGCAGG CGGTGCAGTG CGAGGACTGC CATGCGCGCA AGCAGAGCGG GGCTTTCAGC
GCGTTGATTT CCGCAGAAGG GCTTTTGGGC GAGGCCAACG TGGCCGAAGT CGCGAAGCTG
CCGGACCGAC GGCTGGTGGA CGCCGGTATC GTCGAACTCG GCATGCCGTA TTACAAGGTC
CAGGACGATG GGCGCATCGT CGAGAACGTG GCCGACGTGC TTTATGCCAG CCGTCTCGAT
CCGTCCATGT CGATTCTCAG GTCGGAAACG GCCCGGACGG TCGAGAACGA GTTCAAGACC
CTGAGCCGTG CCGAGGCGCT GGCTTTCGCC GATCTGGACG AGGCGGCGGG GCAGAAGCTG
GCGGCGGATC TCCCTTCCGG CGAGGCGCTG CTGTTCGGCT CGAAGGTCGG GCACAGTTCG
CTGCGCGGAT TCGCCCTGAT CCAGACGCGG GGGACCCGGA CCCTGGCCTA TGGCGACGTC
CTCAAGGGCC GGGTGGAGAG CCGGCCGGCG AAGGCCAAGG ACCGGACCCG GATTTTCGGC
CAGGGGTTCG GCAACCTGGT CGCGGACATT TACTCACTGG CCGTCATGGA CGCCAGCGGC
AGGACACTGC CGGGACTCGT CGAGGGTACC GCGCTGGTCA GGCTGCCTTA CCGGGGCAAG
GCGAAAGCGC GCGGCGGGGT GAACGTGCTG GTTTCCAATG ACGGCAAAGT CTGGCAAAGG
GTCGGCGGGA AGAACCTGCT GGTATTCCGG CCACGGGGCG ACGTGGACGG TTACGTCGTG
GTCCGGATCA GGCGTTCCGC CCTCTATCTG ACCCTCGCCG ACAAGGTGGG CTAA
|
|---|
| Protein sequence | MWIHRLQICP WLWAVCFIAG ILPSYGGEAP ADNGFDRAVL HPAIPLLDES GRHVLDSGLP
YSPKNSCGNG SGSGCHDYAR ITRGYHFEQG RDETRDGFGN KLGLPQLTGP GYFGGYNCMS
GNAPGWLARK SNGSAAEFGD FGAPDLVRYC GACHSGGGWG EFDRNGGRYD EQSAETVKAF
DGDYFSRQFQ EPGKTGQYGG SGPSEVVAWD WRRSGVREAD CMLCHADFSR LKIFPPSGLG
TGGSESAALQ FARLRDEKFI AGGFFRHAAS AIWEFLDVRP DTEGGAALLA VERTPATGTA
TPDYRLVLDD QGNPKLHWNR DAFDESGKIQ VPMLRFPASD NCMYCHKTGN SRRGFYGFGP
EVRVRMAGDG TTITDFRTDV HKGAVWTEDN GQARVIDNCN ACHARQYYKS PAANVDLDAD
HNFPKGNGDN DVRNDLDNAP PPASCEHCHD QAAKPALPSG HKNVLEAHRE IWKANGDMRG
YPENTLDRIT QTHLNVVACQ TCHISRLADN GKEFPMRYRY RVGYGGRLKI FPYKPAYRYF
VQDRTSGRVL NRYERFSVIE ERTGSDGGNY GAILEPASGK ELGRVVMNGD EFGEPPTFAD
YKALKQAYDA LLGMKGYAMP NVRFVYIESN EYALSHATRP SPQAVQCEDC HARKQSGAFS
ALISAEGLLG EANVAEVAKL PDRRLVDAGI VELGMPYYKV QDDGRIVENV ADVLYASRLD
PSMSILRSET ARTVENEFKT LSRAEALAFA DLDEAAGQKL AADLPSGEAL LFGSKVGHSS
LRGFALIQTR GTRTLAYGDV LKGRVESRPA KAKDRTRIFG QGFGNLVADI YSLAVMDASG
RTLPGLVEGT ALVRLPYRGK AKARGGVNVL VSNDGKVWQR VGGKNLLVFR PRGDVDGYVV
VRIRRSALYL TLADKVG
|
|---|
| |