Gene MCA0423 details

Gene Information

• Locus tag: MCA0423
• ID: 3102871
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: +
• Start bp: 423936
• End bp: 427412
• Gene Length: 3477 bp
• Protein Length: 1158 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 637169642
• Product: cytochrome c5530
• Protein accession: YP_112953
• Protein GI: 53802358

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.183193
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACTCGA AACATCTTCA GCAACGCGGA GGGCCGCTGG GCGTTGCGAC GGGCGTCGCG 
GCGCTGGTGC TCGCCCTCGC CGGTGGAGGG GCGCAGGCCG CTTCCGTCTC CGGTTCGGCC 
AAGCTCGATG CCGGGCTGGG CAAGGTGAGC GTCAAAGGTA AAACAGCGGG TCTTGCACCG 
GGCTCATGGG TATCGATTTA CGATGCCGAC AGCAACATGC TCCTTTACAC GGCCAAGACC 
GACGGCAAGC AGAAATTCAA GGTCACGCTG CAGAACGGCG GGGTGCCTTG CCGGTTGCGC 
CTGGAGACCG GCGATGGCAG CAAGGTGCTG GTGCCGGTGG GCGGCGCCGA CGCCTCGTGC 
AAGAAGGCGG CGGCCTGTTC CATCCAGAAT CCGGCGAGCG ATGTGGAAAT CGCCGAAGGC 
CAGTCGGTCG AATTCGCCGC CTGGGCCAAG GCGAAGAAGA AGGTGACGCT GAATTATCTT 
TGGACCGTGA GCGACGGTTC GGACCCGTAC CAGAGCCCTA GCTTCTCGCA TCAGTTCAAT 
CACGCCGGCC AGTACCGCGT GATGCTGCAG GTGGCCGATT CCACTGGCAA CCGGTGTGCG 
GACGACGTGG TCGTCCGGGT GGCGCCGCCG AACGCCAATC CTTATCCCAA GGTTTCCGAG 
CGGCCGGCCC CGACCGTAGC CGAGGCCTTG AACGCGGCGG ATGGTTCTTA TGTGGTCATG 
CCGTTCGAGG AAACCGGTAT GCAGGGCGGT AGCCAGGTCA CACTGCCGTT CAATCCGCTC 
ATTCCTTACA ACACCCTCAA CGCCCAGGTG TTCAAGAAGG TGAAGCAGAA GCCGGCACTC 
ATCGATCCCA GCGAGCTCGA CGTCTTCTAC TCGGCGGCTT CCAATCCGAA GGACCCGGTG 
GGAGGCGACT CCATCAACTC GACCAGCCAG AACCGGTTTT CGACCGGGGA ATCCGGTGCC 
AACTGGGATC CCGCCCAGAC CACCGCCAGC CAGACCGTCC TGATCGGCGG CCGTGACTTC 
GCCGAGGCCA CGCTGCGCAA GACCGAGATG TGGGACAAGA TCGACCAGCC CAACTCGAAC 
CTTTCCGGCA AGCCCAAGAA CGGCAAGTCC ATGGCGGAGC AGCAGAGCAC CTACACACCC 
GCCAAGCCGA TGATGCAGCT GGACGAGGGC ATCCGCGGCA ATGCCGACGA AGGCGCGGGC 
GCCCGCAGGA TGCCGGGCGC GGCGAATCCT TACCGGGCCA ACGATCCGCA GCAGATTTCC 
GCCTACGACA GCGCCTCCAA GACCTTCCTC GCCCAGTTCA TTCCGGCGAG CGATGTCGAC 
GACAAAGGGC GGGTCAATCC CTATCCGCTG TTCCGGGTCG AAGCCCGGGA CAAGGGCGGC 
AACCTGGTGG CCAAGACCGA TGCGGTGTTC TCCACGGCCT CGGAAACCCG CTGCCGCGAA 
TGTCACGCCA AGGGCAAGGT GGCCGCGGAC GATACCGTGT GGCGCACGCC GGTGCAGGAG 
ACCGAGCTGG TCAACGCCGA TGGGAGTCCG GGGCCGGCCA CCGGCGCCGG CAGTTTTTCG 
GCCGGCAACA CCGGCTACAA CGGCATCTGG CCGCCGGCGA TCCACAACGT GTTCAACGTC 
AACGCGTACG ATCCCCTGCC GCCGAACAAG CCGGCGCCCT ACTTGTTGGC CGGTGCCGTG 
CCGGCGGATG CTTCCGGACT GCGCACCGAC CGGGTGGCCG AGTCGCGCGT CGGTGCGGAC 
GGCAAGCTGC AGATCCGTTT GAAGTTCAAG GACGCATCGG AATACGGTGA CCCGGACGAC 
TGGGTCGCAC AGGAAAAAGC GGCGTTGTTC AACACACTGG TACTGCACGA CTATATGGTC 
AAATACAGCC CCACCGGCAC CATCTCTTCG CAGATCGCCG ATCTGGTCGA GGACAAGCTG 
AGTGGCAGCC GGGGCGCGGC GATGTATTTC TGTTCCTCGC ATCACACCAG CCAGTTGAAG 
TTCGACACCG GTGTCGCGGC CCGCTCCTAT CCTTCCAACC GCTCCGACTA TTCGCGTGCT 
TTCCACGCCT TCCACGGCAA GATGCAGGTC TACGCGCAGG ATGTCTCGGC TTCCGAAAGC 
GCCGATGGCC AGGAGCACAA GAAGGGCGAG CTGATCCGCG ACCGGCGCGG CCATCCGCTG 
ATGTTCGGCG GCCGCGGCTG GGATTCGCAG CACAACGACA ACAACGGCGT TCCGGTCAAG 
TCCGACGGGT CCGGGACCAG CTACGCCTGG GACACCGGCA AGAACGACTG GGCACCGGAG 
CAGTTCCCCA TGCACCCCAA GGGCGAGCTG CTGTATCAGT TCGGTGAGGG CGTGGCCGCG 
GAGGAGAACT GCGCGAAGTG TCACACCGGC CACACCGAGA AAGCCTACCG CGACATCCAC 
TATGCCTCGG GCCTCAAGTG CGATAACTGT CACGGTGACA TGCTGGCGGT CGGCAATGCC 
TATTCCAGCC CCCGCTACGA TGCCAACCTG AGCGGCGCCG GTGCCTATGT CGGCGATTCC 
GTCCACTTCA GACGGCCCTG GCTGGACGAG CCGGACTGCG GTTCCTGTCA CGTGGGCGAT 
GGCAACCGGA AGGACCCGAA CCAGGGCTTC TTTAGCGCCG GTGTGAAGAA AACCGCCTGG 
CAGGCGAATG ATCCGGCCAA GGCCAGCGTG TTCCCGGATG ATGCCCGCTT CGCGGTCATG 
CCTGTGGTCG AGACGCGCAA GGAGAAATCG ACCGACGCCA ATGGCAACAC CGTCTATGTG 
GACAAGCAGG TGTCCGTAGC GCTGTTCCGC AAGAGCAAGG ACGTGCACGG CACCGGATCG 
GGCGGCGCCA TCGCCTGCTC CACCTGCCAT GGCGGCTCCC ATGCCATCTG GCCGAACGCC 
GACCCGGACG CCAATGACAA CGTGACCGCC CGGCAGTTGC AGGGCTACGA CGGCAATATC 
GTCGAATGTT CGGTCTGCCA TGTGAAGGAT GATTTCAAGG AAGGGCTGGT GGCTACCGAC 
GGTGGCGCTA GCAACAAGGG CGTGGCGCAG GGTGTGCGCG ATGGCAAGGT GGTGGATGCC 
ACCAGTGGGC GCGCCTACCT GGCCGGGCCG CACGGCATGC ATCCGGTCAA CGATCCGTAC 
TGGTGGAAGG AGGCCGCCGC TTCTGCGCCC AACGGCAGCG GCACCCGCAA GGGCGGCTGG 
CACAACGACT TTGCCAAGAA GCCGGGGCCG TTCGGCGAAG ACCAGTGTGC GGCCTGCCAC 
GGCAGTGACC ACAAGGGTAC GCGGCTGTCG AAGACTCTGA CGGCCCGCGA GTTCGTGAAC 
GAGAAGGGCA AGGTGGTCAA GGTGGCCGCC AACACCCCGA TCGGCTGCAA TCTCTGCCAC 
AGCCTGCAGA AGAGCTTCAC GGGCGTTCCC ACGGGACAGC CTCTGGCCTA TCCGCCGCCG 
ACGCCCTCGC CGATCCACGG TGGCGGGGGC GGCGGAGGTG GCGGCCACGG TCACTGA 

 

Protein sequence

MNSKHLQQRG GPLGVATGVA ALVLALAGGG AQAASVSGSA KLDAGLGKVS VKGKTAGLAP 
GSWVSIYDAD SNMLLYTAKT DGKQKFKVTL QNGGVPCRLR LETGDGSKVL VPVGGADASC 
KKAAACSIQN PASDVEIAEG QSVEFAAWAK AKKKVTLNYL WTVSDGSDPY QSPSFSHQFN 
HAGQYRVMLQ VADSTGNRCA DDVVVRVAPP NANPYPKVSE RPAPTVAEAL NAADGSYVVM 
PFEETGMQGG SQVTLPFNPL IPYNTLNAQV FKKVKQKPAL IDPSELDVFY SAASNPKDPV 
GGDSINSTSQ NRFSTGESGA NWDPAQTTAS QTVLIGGRDF AEATLRKTEM WDKIDQPNSN 
LSGKPKNGKS MAEQQSTYTP AKPMMQLDEG IRGNADEGAG ARRMPGAANP YRANDPQQIS 
AYDSASKTFL AQFIPASDVD DKGRVNPYPL FRVEARDKGG NLVAKTDAVF STASETRCRE 
CHAKGKVAAD DTVWRTPVQE TELVNADGSP GPATGAGSFS AGNTGYNGIW PPAIHNVFNV 
NAYDPLPPNK PAPYLLAGAV PADASGLRTD RVAESRVGAD GKLQIRLKFK DASEYGDPDD 
WVAQEKAALF NTLVLHDYMV KYSPTGTISS QIADLVEDKL SGSRGAAMYF CSSHHTSQLK 
FDTGVAARSY PSNRSDYSRA FHAFHGKMQV YAQDVSASES ADGQEHKKGE LIRDRRGHPL 
MFGGRGWDSQ HNDNNGVPVK SDGSGTSYAW DTGKNDWAPE QFPMHPKGEL LYQFGEGVAA 
EENCAKCHTG HTEKAYRDIH YASGLKCDNC HGDMLAVGNA YSSPRYDANL SGAGAYVGDS 
VHFRRPWLDE PDCGSCHVGD GNRKDPNQGF FSAGVKKTAW QANDPAKASV FPDDARFAVM 
PVVETRKEKS TDANGNTVYV DKQVSVALFR KSKDVHGTGS GGAIACSTCH GGSHAIWPNA 
DPDANDNVTA RQLQGYDGNI VECSVCHVKD DFKEGLVATD GGASNKGVAQ GVRDGKVVDA 
TSGRAYLAGP HGMHPVNDPY WWKEAAASAP NGSGTRKGGW HNDFAKKPGP FGEDQCAACH 
GSDHKGTRLS KTLTAREFVN EKGKVVKVAA NTPIGCNLCH SLQKSFTGVP TGQPLAYPPP 
TPSPIHGGGG GGGGGHGH