Gene MCA0419 details

Gene Information

• Locus tag: MCA0419
• Symbol: ccmE
• ID: 3102808
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: -
• Start bp: 419080
• End bp: 419541
• Gene Length: 462 bp
• Protein Length: 153 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 637169639
• Product: cytochrome c-type biogenesis protein CcmE
• Protein accession: YP_112950
• Protein GI: 53802361
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG2332] Cytochrome c-type biogenesis protein CcmE

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGACGC CGCGACAAAG ACGCATGACG TGGGTCGCTT TGATGGTGGC GGGCGTGTCG 
CTCGCCGCTT TCTTCGCCCT CACGGCGTTC CAGAAAAATC TCCTGTATTT CTACACGCCC 
TCCCAGGTCG CTTCCGGCGA AGCCCCGAAG GGCTATCCGT TCCGCATCGG CGGACTGGTG 
GTCAAGGACA GCGTGAAGCG CGAGCCGGAC AGCCTGACCG TGCGCTTCGA GGTGTCAGAC 
GGGCCGAACG CCGTACCGGT GCTCTATACC GGCATTCTTC CCGACCTGTT CCGGGAAGGC 
CAGGGCATCA TCGCCGTGGG CCAGATCGAC GATGGCGGCA CTTTCCAGGC GACCGAAGTG 
CTGGCCAAGC ACGATGAGAA TTACATGCCG CCCGAAGTCG CCGAATCCCT GAAGAAGAAC 
GGTGGACTCC CCGCCGACTA CTCGGAGTAC CGGAAAAAAT GA 

 

Protein sequence

MMTPRQRRMT WVALMVAGVS LAAFFALTAF QKNLLYFYTP SQVASGEAPK GYPFRIGGLV 
VKDSVKREPD SLTVRFEVSD GPNAVPVLYT GILPDLFREG QGIIAVGQID DGGTFQATEV 
LAKHDENYMP PEVAESLKKN GGLPADYSEY RKK