Gene MCA0400 details

Gene Information

• Locus tag: MCA0400
• Symbol: lpxB
• ID: 3102993
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: +
• Start bp: 403723
• End bp: 404877
• Gene Length: 1155 bp
• Protein Length: 384 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 637169620
• Product: lipid-A-disaccharide synthase
• Protein accession: YP_112931
• Protein GI: 53802405
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0763] Lipid A disaccharide synthetase
• TIGRFAM ID: [TIGR00215] lipid-A-disaccharide synthase

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.636701
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTGAGC GTGCTCCGCT GGTCATGCTG GTTGCCGGGG AAGTCTCCGG CGATCAGCAT 
GCCGCTGCCA TGTTCCGCGA ACTCCGGACC CTGATTCCGC AAGTCCGCGG CATCGGTATG 
GGCGGCTCCG CCATGCGCGA GGCCGGCATC GACATCCGGG TCGATTCCAC CGGGCTGGGC 
GTCATCGGTC TGGCCGAGAT CGCCCGCCAT TACGGTGAGA TCCGCCGAGC GCTCGAGGCC 
ATGAAGGCAT TGGCCCGCAC CGAGCGGCCC GATCTGCTGA TCTGCGTCGA CTACAAGGAA 
TTCAATTTCC GCCTGGCCCG GGCCGCCAAG GCCGCCGGCA TCAAGGTGCT GTTCTACGTC 
AGCCCGCAGG TGTGGGCGTG GCGGCCGGGA CGGGTCAAGA GCTATGGCAA GGCGATCGAC 
CACATGGCCG TGATCTTTCC GTTCGAAGTG CCCTTCTACG AAAGGCATGG CATTCCGGTG 
ACCTATGTCG GTCATCCTCT TGCCGGTAAG ATTGCGCCGG TGGCTGACAA AGGGAAGGTA 
CGGCGGGAGC AGGGGATGGA CGGCCCCGGC CCTCTGGTCG GCCTGCTGCC GGGCAGCCGG 
GGCAATGAAA TCCGCCGGCT GCTGCCGATG CTGCTGCAGA CCGCGGCGCG AATCGCCGGG 
GAACGACCGG ATGCCCGGTT CGTGCTGATC CAGGCGCCAT CGGTCGCCGA CGAGCTGTTG 
GCCGCCGAAC TGGAGACGGC GCCGGTGCCG GTTCGGGTCG TCAAGGAACG GCGCCATGAG 
ATCTTGGGCA GTTGCGATGC GGTGATCACC ACCTCGGGCA CGGCGACCCT GGAAGTCGCT 
CTCCTCGGCG TGCCCATGGC CATCGTCTAC AAGCTGGCAC CGCTGAGCTA TTGGCTCGGA 
AGGCTGCTGG TAACCATCCC TTTCATCGGC CTGCCCAACA TCCTGGCGGG GCGCAGGATC 
GTTGAGGAGT TTATCCAGCA CGCAGCCAAT GCGGAGATGG TCGGCGGCGA GATCCTGCGG 
ATCCTGAATG ATCCGGCCTA CGCACTGCGG ATCCGGGACG ATCTGGTGGA GGTGAGGACC 
CTGCTGGGCG AAGGCGGCGG TTCCCGGCGT CTGGCCGAAC TGGCCGCGGA ATTGCTTGAA 
CGGCCGGCCC GGTAG 

 

Protein sequence

MAERAPLVML VAGEVSGDQH AAAMFRELRT LIPQVRGIGM GGSAMREAGI DIRVDSTGLG 
VIGLAEIARH YGEIRRALEA MKALARTERP DLLICVDYKE FNFRLARAAK AAGIKVLFYV 
SPQVWAWRPG RVKSYGKAID HMAVIFPFEV PFYERHGIPV TYVGHPLAGK IAPVADKGKV 
RREQGMDGPG PLVGLLPGSR GNEIRRLLPM LLQTAARIAG ERPDARFVLI QAPSVADELL 
AAELETAPVP VRVVKERRHE ILGSCDAVIT TSGTATLEVA LLGVPMAIVY KLAPLSYWLG 
RLLVTIPFIG LPNILAGRRI VEEFIQHAAN AEMVGGEILR ILNDPAYALR IRDDLVEVRT 
LLGEGGGSRR LAELAAELLE RPAR