Gene MCA0386 details

Gene Information

• Locus tag: MCA0386
• ID: 3103217
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: +
• Start bp: 391340
• End bp: 391912
• Gene Length: 573 bp
• Protein Length: 190 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 637169605
• Product: 2'-5' RNA ligase, putative
• Protein accession: YP_112917
• Protein GI: 53802434
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG1514] 2'-5' RNA ligase
• TIGRFAM ID: [TIGR02258] 2'-5' RNA ligase

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTGCTC TGCTTCCTGA ACCGCCTCCG CTGCGTCTGT TTTTCGCGCT TTGGCCGGAC 
GCGGGTGTTC GTGAGACCTT GGGTAGGCTG GTCCGCTCCC TCCGCCGTAC GGTCAAAGGG 
CGCTGGGTCG AGCCGGACAA GCTCCATCTC ACTCTGGCAT TCCTGGGGGC GGTGCCGGCG 
GAACGTTTGC CGGAGCTGAC AGCAATGACG GGGGATCTCG ATCTGCCGCC CTTTGAGTTG 
GCGCTGGACC GGCTGGAATA CTGGCAGCGT AACCGAGTGT TGTGTCTGGG AGCAAGCGCA 
ACCCCCCCGC TGCTCATCGA ACTGGTCGGA ATCCTGAATT CGAAGCTGGG TCGGGCGGGA 
TTCCCTGTCG AGCGGCGGCC GTTCCGGCCG CATCTGACAT TGGCGCGCAA GGCCGAGGCG 
GCCTGGTCCG CCATGCCTTT GAAGACGTCC GTGACCTGGC CGGTGGATCG CGTCACCCTC 
GTCGAGTCGC GCCTTTCCAG GGCCGGCCCG CTCTATCTCG TGCGTGCCGA AAAGCAGTGG 
CGGGCTATGC CCGAAATGGC CGCTATGAAA TAA 

 

Protein sequence

MSALLPEPPP LRLFFALWPD AGVRETLGRL VRSLRRTVKG RWVEPDKLHL TLAFLGAVPA 
ERLPELTAMT GDLDLPPFEL ALDRLEYWQR NRVLCLGASA TPPLLIELVG ILNSKLGRAG 
FPVERRPFRP HLTLARKAEA AWSAMPLKTS VTWPVDRVTL VESRLSRAGP LYLVRAEKQW 
RAMPEMAAMK